RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-215ENST00000515479 STK3Q13188 491 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 RAPGEF1Q13905 1077 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 ARHGEF7Q14155 803 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 ANO7Q6IWH7 933 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 APOA5Q6Q788 366 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 RANBP10Q6VN20 620 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 LIX1LQ8IVB5 337 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
RUFY3-215ENST00000515479 CHPFQ8IZ52 775 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 NGDNQ8NEJ9 315 aaKnown RBP5.3□□□□□ -1.56
RUFY3-215ENST00000515479 NSMCE1Q8WV22 266 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 TMEM184CQ9NVA4 438 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
RUFY3-215ENST00000515479 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 KNDC1Q76NI1 1749 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 ANKRD26Q9UPS8 1709 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
RUFY3-215ENST00000515479 NUP155O75694 1391 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 MAP3K5Q99683 1374 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 KIF7Q2M1P5 1343 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 RPGRIP1LQ68CZ1 1315 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 H3BNC9 293 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 RAB27BO00194 218 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 GATMP50440 423 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 LINC00205P59089 165 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 C3orf38Q5JPI3 329 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 KIAA0319LQ8IZA0 1049 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 NMD3Q96D46 503 aaKnown RBP5.29□□□□□ -1.56
RUFY3-215ENST00000515479 ANP32EQ9BTT0 268 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 PRDM11Q9NQV5 511 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 RIMKLBQ9ULI2 386 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 NOB1Q9ULX3 412 aaKnown RBP5.29□□□□□ -1.56
RUFY3-215ENST00000515479 UTRNP46939 3433 aa5.29□□□□□ -1.56
RUFY3-215ENST00000515479 VIRMAQ69YN4 1812 aaKnown RBP5.29□□□□□ -1.56
RUFY3-215ENST00000515479 ROCK2O75116 1388 aaKnown RBP5.29□□□□□ -1.56
RUFY3-215ENST00000515479 SPATA31A1Q5TZJ5 1347 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 NRXN1Q9ULB1 1477 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ISM1B1AKI9 464 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 AGPSO00116 658 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ANP32CO43423 234 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 U2AF1L5P0DN76 240 aaPredicted RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 CD19P15391 556 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ACVR2AP27037 513 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 MCM5P33992 734 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 RPS16P62249 146 aaKnown RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 HTRA4P83105 476 aaPredicted RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 U2AF1Q01081 240 aaKnown RBP eCLIP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 CFHR3Q02985 330 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 CFHR1Q03591 330 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 SLC29A2Q14542 456 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 MFSD13AQ14CX5 517 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 TWIST1Q15672 202 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 CNGA2Q16280 664 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ZNF750Q32MQ0 723 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ANKRD13BQ86YJ7 626 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ZDHHC17Q8IUH5 632 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 SMCR8Q8TEV9 937 aaPredicted RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 VCPIP1Q96JH7 1222 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 DHX36Q9H2U1 1008 aaKnown RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 MID2Q9UJV3 735 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 THRAP3Q9Y2W1 955 aaKnown RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 AKAP12Q02952 1782 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 OVOS2A0A0G2JMS6 1433 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 OVOS2A0A0J9YW53 1432 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 OVOS2Q6IE36 1432 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 PARP4Q9UKK3 1724 aaKnown RBP5.28□□□□□ -1.56
RUFY3-215ENST00000515479 ZMYM2Q9UBW7 1377 aa5.28□□□□□ -1.56
RUFY3-215ENST00000515479 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 FAM90A10PA6NDY2 464 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 CLIC1O00299 241 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 FRS3O43559 492 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 PARP1P09874 1014 aaKnown RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 ATF7P17544 494 aaPredicted RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 THBS4P35443 961 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 CPT1AP50416 773 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 PRELPP51888 382 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 RPS13P62277 151 aaKnown RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 SLC14A1Q13336 389 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 NPY5RQ15761 445 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 RUSC1-AS1Q66K80 236 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 C11orf44Q8N8P7 122 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 EDC3Q96F86 508 aaKnown RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 ZNF668Q96K58 619 aaPredicted RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 SHANK3Q9BYB0 1731 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 POT1Q9NUX5 634 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 GAR1Q9NY12 217 aaKnown RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 NKX1-2Q9UD57 310 aaPredicted RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 ASAP1Q9ULH1 1129 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 L1RE1Q9UN81 338 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 ALS2Q96Q42 1657 aa5.27□□□□□ -1.57
RUFY3-215ENST00000515479 EIF3AQ14152 1382 aaKnown RBP5.27□□□□□ -1.57
RUFY3-215ENST00000515479 TECPR2O15040 1411 aa5.26□□□□□ -1.57
RUFY3-215ENST00000515479 AQP7P3A6NL99 342 aa5.26□□□□□ -1.57
RUFY3-215ENST00000515479 A8MVJ9 347 aa5.26□□□□□ -1.57
RUFY3-215ENST00000515479 PRPF3O43395 683 aaKnown RBP5.26□□□□□ -1.57
RUFY3-215ENST00000515479 TLR2O60603 784 aa5.26□□□□□ -1.57
RUFY3-215ENST00000515479 TPH1P17752 444 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms