RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 DDI1Q8WTU0 396 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 BAP1Q92560 729 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 TMA16Q96EY4 203 aaKnown RBP12.98□□□□□ -0.33
PTCD2-210ENST00000515198 SLC39A13Q96H72 371 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 IRX2Q9BZI1 471 aaPredicted RBP12.98□□□□□ -0.33
PTCD2-210ENST00000515198 EDEM3Q9BZQ6 932 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 STAP1Q9ULZ2 295 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 PCDHGA2Q9Y5H1 932 aa12.98□□□□□ -0.33
PTCD2-210ENST00000515198 FANCMQ8IYD8 2048 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 FAM170AA1A519 330 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 TYW5A2RUC4 315 aaKnown RBP12.97□□□□□ -0.33
PTCD2-210ENST00000515198 GOLGA8SH3BPF8 625 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 TSPAN3O60637 253 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 IGLV3-25P01717 112 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 MMP8P22894 467 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 RNASE9P60153 205 aaKnown RBP12.97□□□□□ -0.33
PTCD2-210ENST00000515198 MESP2Q0VG99 397 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 ASIC2Q16515 512 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 FIGNQ5HY92 759 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SFMBT2Q5VUG0 894 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SYT13Q7L8C5 426 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 RNF34Q969K3 372 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 IQCDQ96DY2 449 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SLC2A11Q9BYW1 496 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SEMA4AQ9H3S1 761 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 TMEM51Q9NW97 253 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCD2-210ENST00000515198 DDIT4Q9NX09 232 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTCD2-210ENST00000515198 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 FBXO10Q9UK96 956 aa12.97□□□□□ -0.33
PTCD2-210ENST00000515198 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 M0QYT0 321 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 TRIM24O15164 1050 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CBFA2T2O43439 604 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 MOCS2O96007 188 aaPredicted RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CALB1P05937 261 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CISD3P0C7P0 127 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 UNGP13051 313 aaPredicted RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 ABCB4P21439 1286 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 TNFAIP3P21580 790 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 HOXA6P31267 233 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CCR1P32246 355 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 TIE1P35590 1138 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 PITX1P78337 314 aaPredicted RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CENPCQ03188 943 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 NME3Q13232 169 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 MTA1Q13330 715 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 DMC1Q14565 340 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CLEC16AQ2KHT3 1053 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 C2CD6Q53TS8 623 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 MPP7Q5T2T1 576 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 ARCQ7LC44 396 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 TRMT11Q7Z4G4 463 aaKnown RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 IRF2BP2Q7Z5L9 587 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 CAMKK1Q8N5S9 505 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 ZNF513Q8N8E2 541 aaPredicted RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 HJURPQ8NCD3 748 aaPredicted RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 NELL1Q92832 810 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 BTN2A3PQ96KV6 586 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 PCDHB18PQ96TA0 734 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 C11orf70Q9BRQ4 267 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 TTYH3Q9C0H2 523 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.33
PTCD2-210ENST00000515198 AIPL1Q9NZN9 384 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 COX16Q9P0S2 106 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.33
PTCD2-210ENST00000515198 GOLGA6L7A0A1B0GV03 622 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 A0A1W2PQJ5 194 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 KCNU1A8MYU2 1149 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 PROB1E7EW31 1015 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 K7ESF4 209 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 GFRA2O00451 464 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-210ENST00000515198 F9P00740 461 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 TDGF1P13385 188 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 HOXD9P28356 352 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-210ENST00000515198 SLC6A4P31645 630 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 PBX1P40424 430 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 KIR2DL1P43626 348 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-210ENST00000515198 SULT1E1P49888 294 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 KLHL30Q0D2K2 578 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 EIF4EBP2Q13542 120 aaPredicted RBP12.95□□□□□ -0.34
PTCD2-210ENST00000515198 E2F5Q15329 346 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 SLC25A52Q3SY17 297 aa12.95□□□□□ -0.34
PTCD2-210ENST00000515198 FAM133BQ5BKY9 247 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms