RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FAM78AQ5JUQ0 283 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 CC2D1AQ6P1N0 951 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 Q6ZNB5 142 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MTSS1LQ765P7 747 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 NT5DC3Q86UY8 548 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 VSIG1Q86XK7 387 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MIB1Q86YT6 1006 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ADAM32Q8TC27 787 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 FAM71BQ8TC56 605 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 BTN2A3PQ96KV6 586 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 NECAB3Q96P71 396 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 HAPLN3Q96S86 360 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 MYADMQ96S97 322 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 LRFN3Q9BTN0 628 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 SLITRK6Q9H5Y7 841 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 WDCPQ9H6R7 721 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 TRMT1Q9NXH9 659 aaKnown RBP12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 USP18Q9UMW8 372 aa12.44□□□□□ -0.42
PDLIM5-220ENST00000514830 PIEZO1Q92508 2521 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 LEFTY2O00292 366 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 PRPSAP2O60256 369 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 KIF5CO60282 957 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 GPR37L1O60883 481 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ECI2O75521 394 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 PALMO75781 387 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 APOEP02649 317 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 TUBB4AP04350 444 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 KRT7P08729 469 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 CTNNA2P26232 953 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 HTR7P34969 479 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 CTNNA1P35221 906 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 HARS2P49590 506 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 NME3Q13232 169 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 CDO1Q16878 200 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ZC3H12AQ5D1E8 599 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 RHOT1Q8IXI2 618 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ATP6V0D2Q8N8Y2 350 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 ELSPBP1Q96BH3 223 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 OTUB2Q96DC9 234 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 HES6Q96HZ4 224 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 OSBPL2Q9H1P3 480 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 NR2E1Q9Y466 385 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
PDLIM5-220ENST00000514830 C5orf42Q9H799 3197 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 XIRP2A4UGR9 3374 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 CCDC66A2RUB6 948 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF487B1APH4 448 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 I6L893 689 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 GFRA2O00451 464 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 SPOPO43791 374 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 KLKB1P03952 638 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 IL1R2P27930 398 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 SLC11A2P49281 568 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 ATXN1P54253 815 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 C5orf22Q49AR2 442 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 ERMARDQ5T6L9 678 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 MEI1Q5TIA1 1274 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 PTCRAQ6ISU1 281 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 CPXM2Q8N436 756 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 PEBP4Q96S96 227 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 TKTL2Q9H0I9 626 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 RETREG1Q9H6L5 497 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 ZFP14Q9HCL3 533 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 DDX56Q9NY93 547 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 TBC1D14Q9P2M4 693 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 AMFRQ9UKV5 643 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 FZD10Q9ULW2 581 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 CCL26Q9Y258 94 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 PCDHA3Q9Y5H8 950 aa12.42□□□□□ -0.42
PDLIM5-220ENST00000514830 CHD5Q8TDI0 1954 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ACSL4O60488 711 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 COL4A2P08572 1712 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ALADP13716 330 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 TCF4P15884 667 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms