RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 LIPCP11150 499 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ITIH1P19827 911 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 RXRGP48443 463 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CD97P48960 835 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ACOT2P49753 483 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ZNF132P52740 706 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 GALCP54803 685 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 MFAP3P55082 362 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 MCL1Q07820 350 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 NECTIN1Q15223 517 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TDRD10Q5VZ19 366 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 RBM44Q6ZP01 1051 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 SV2AQ7L0J3 742 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 HS2ST1Q7LGA3 356 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ZFAND4Q86XD8 727 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TRIM22Q8IYM9 498 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 EFCAB3Q8N7B9 438 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TEX19Q8NA77 164 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 LEO1Q8WVC0 666 aaPredicted RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 MYLPFQ96A32 169 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 FAM84AQ96KN4 292 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TMEM134Q9H6X4 195 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 EPB41L5Q9HCM4 733 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ANO2Q9NQ90 1003 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CYLDQ9NQC7 956 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ELOVL2Q9NXB9 296 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 DPP3Q9NY33 737 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 WDR35Q9P2L0 1181 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PISDQ9UG56 409 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CA5BQ9Y2D0 317 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PCDHB11Q9Y5F2 797 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 WNT7AO00755 349 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 HNRNPDLO14979 420 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 HUS1O60921 280 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 HIP1RO75146 1068 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 GP1BAP07359 652 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PDGFRBP09619 1106 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 JMJD7P0C870 316 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 IFNAR1P17181 557 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PFKLP17858 780 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 LMO2P25791 158 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PDX1P52945 283 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CACNA2D1P54289 1103 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 RPS14P62263 151 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 ENPP2Q13822 863 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 SV2CQ496J9 727 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 FNDC3BQ53EP0 1204 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 HECTD3Q5T447 861 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TMEM215Q68D42 235 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 SCARA3Q6AZY7 606 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 Q6ZUG5 572 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 RSRC2Q7L4I2 434 aaKnown RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 RAB11FIP2Q7L804 512 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TMPRSS9Q7Z410 1059 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 B3GNT8Q7Z7M8 397 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 OSTM1Q86WC4 334 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 DAW1Q8N136 415 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 FBXO39Q8N4B4 442 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 FBXO32Q969P5 355 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 FUBP3Q96I24 572 aaKnown RBP eCLIP3.43□□□□□ -1.86
CHD1-211ENST00000514344 PPP1R13BQ96KQ4 1090 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 PKMYT1Q99640 499 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 NEUROG2Q9H2A3 272 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 TMEM30AQ9NV96 361 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CUEDC1Q9NWM3 386 aaPredicted RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 MAGEC2Q9UBF1 373 aaPredicted RBP3.43□□□□□ -1.86
CHD1-211ENST00000514344 NUDT5Q9UKK9 219 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CLEC4EQ9ULY5 219 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 DAAM1Q9Y4D1 1078 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 SNX9Q9Y5X1 595 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 JMJD1CQ15652 2540 aa3.43□□□□□ -1.86
CHD1-211ENST00000514344 CCDC187A0A096LP49 1063 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 LY6G6EA0A0G2JKS1 128 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 K7EM74 188 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MUSKO15146 869 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 NEMFO60524 1076 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 GIMD1P0DJR0 217 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PRKAR1AP10644 381 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TRAPPC10P48553 1259 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PPP2CBP62714 309 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 PPP2CAP67775 309 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 EHHADHQ08426 723 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SSRP1Q08945 709 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 NR5A1Q13285 461 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 MRPL49Q13405 166 aaKnown RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 HDAC1Q13547 482 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 CAMK2GQ13555 558 aaPredicted RBP3.42□□□□□ -1.86
CHD1-211ENST00000514344 ECM1Q16610 540 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 SLC45A4Q5BKX6 768 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 TTC22Q5TAA0 569 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 C4orf50Q6ZRC1 276 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ANKS1BQ7Z6G8 1248 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 ZNF276Q8N554 614 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 OXR1Q8N573 874 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 KIAA1958Q8N8K9 716 aa3.42□□□□□ -1.86
CHD1-211ENST00000514344 OR14C36Q8NHC7 312 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms