RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 BECN1Q14457 450 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 ZNF234Q14588 700 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 PKDCCQ504Y2 493 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 MPPE1Q53F39 396 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 LCLAT1Q6UWP7 414 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 RGL4Q8IZJ4 473 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 HDDC3Q8N4P3 179 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 UBA3Q8TBC4 463 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 EDEM1Q92611 657 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 DHTKD1Q96HY7 919 aaPredicted RBP15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 NT5C1BQ96P26 610 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 ABCC13Q9NSE7 274 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 STOML2Q9UJZ1 356 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 CLEC4EQ9ULY5 219 aa15.36■□□□□ 0.05
CCHCR1-229ENST00000512418 ADAMTS9Q9P2N4 1935 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 ASPMQ8IZT6 3477 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 CKAP5Q14008 2032 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 TIMM44O43615 452 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 OPHN1O60890 802 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 GNSP15586 552 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 HOXD9P28356 352 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 DAOAP59103 153 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 ARID5AQ03989 594 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 CETN1Q12798 172 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 STILQ15468 1287 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 CCDC40Q4G0X9 1142 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 WDR45BQ5MNZ6 344 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 TMEM270Q6UE05 265 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 PIP4P1Q86T03 277 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 TMPRSS6Q8IU80 811 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 ELOA2Q8IYF1 753 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 MINDY1Q8N5J2 469 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 RBBP8NLQ8NC74 664 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 PRCCQ92733 491 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 TOE1Q96GM8 510 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 WSB2Q9NYS7 404 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 NFE2L3Q9Y4A8 694 aa15.35■□□□□ 0.05
CCHCR1-229ENST00000512418 IGLV3-19P01714 112 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 EPHX1P07099 455 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 PROS1P07225 676 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 NCAM1P13591 858 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 LCP1P13796 627 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 PRKCHP24723 683 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 TPMTP51580 245 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 PLEKHG6Q3KR16 790 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 ADGRF1Q5T601 910 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 TMEM215Q68D42 235 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 MSANTD2Q6P1R3 559 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 FOXR2Q6PJQ5 311 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 UNQ6494/PRO21346Q6UXR6 183 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 CADM4Q8NFZ8 388 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 SLC35F5Q8WV83 523 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 SORCS1Q8WY21 1168 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 IRGQQ8WZA9 623 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 SIPA1Q96FS4 1042 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 DNAAF2Q9NVR5 837 aaKnown RBP15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 MAN1B1Q9UKM7 699 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 PCDHB4Q9Y5E5 795 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 CFAP47Q6ZTR5 3102 aa15.34■□□□□ 0.05
CCHCR1-229ENST00000512418 CACNA1EQ15878 2313 aa15.33■□□□□ 0.05
CCHCR1-229ENST00000512418 PCNX2A6NKB5 2137 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 MEI4A8MW99 385 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 M0QYV0 167 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 P4HA2O15460 535 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 TSPAN3O60637 253 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 ACADMP11310 421 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 HLA-FP30511 346 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 OXTRP30559 389 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 RGS7P49802 495 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 COPAP53621 1224 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 CNGA2Q16280 664 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 ISM2Q6H9L7 571 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 TTI2Q6NXR4 508 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 DNASE2BQ8WZ79 361 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 TMA16Q96EY4 203 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 SCNM1Q9BWG6 230 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 GPR174Q9BXC1 333 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 GTF3C3Q9Y5Q9 886 aa15.33■□□□□ 0.04
CCHCR1-229ENST00000512418 MUC22E2RYF6 1773 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 A0A1B0GTW7 788 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 C1QTNF9BB2RNN3 333 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 KCNJ18B7U540 433 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 IGLV3-27P01718 113 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 C1QTNF9P0C862 333 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 SPINK2P20155 84 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 MAOBP27338 520 aa15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 SIM1P81133 766 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-229ENST00000512418 GCNT1Q02742 428 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms