RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 POLR2BP30876 1174 aaKnown RBP11□□□□□ -0.65
PDLIM5-217ENST00000512274 CDR1P51861 262 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 EPHB3P54753 998 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 NOMO3P69849 1222 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 DUSP4Q13115 394 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 WDR72Q3MJ13 1102 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 C9orf57Q5W0N0 161 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF280DQ6N043 979 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 C11orf63Q6NUN7 778 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 TMEM270Q6UE05 265 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 LPCAT2Q7L5N7 544 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 DEFB119Q8N690 84 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 PIP4K2CQ8TBX8 421 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC20A1Q8WUM9 679 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF606Q8WXB4 792 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 ACDQ96AP0 544 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 PCDHB18PQ96TA0 734 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 ABCB6Q9NP58 842 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 TUBGCP4Q9UGJ1 667 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 R3HCC1Q9Y3T6 440 aaKnown RBP11□□□□□ -0.65
PDLIM5-217ENST00000512274 PCDHB4Q9Y5E5 795 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 BPTFQ12830 3046 aa11□□□□□ -0.65
PDLIM5-217ENST00000512274 J3QKU1 62 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 RIOK3O14730 519 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MED7O43513 233 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SLU7O95391 586 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 FTLP02792 175 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MMEP08473 750 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 KRT5P13647 590 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 ITPKAP23677 461 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 ALDH1A3P47895 512 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 AARSP49588 968 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SEC13P55735 322 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 FBXO43Q4G163 708 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MEI1Q5TIA1 1274 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC23A3Q6PIS1 610 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MON1BQ7L1V2 547 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 DNAJB7Q7Z6W7 309 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MINDY1Q8N5J2 469 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 CCDC33Q8N5R6 958 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 CEP112Q8N8E3 955 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 TTC16Q8NEE8 873 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 MDGA1Q8NFP4 955 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 TPCN2Q8NHX9 752 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 WHAMMQ8TF30 809 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 HNRNPABQ99729 332 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 FAM83CQ9BQN1 747 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 PACSIN1Q9BY11 444 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 DNAI2Q9GZS0 605 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 TASP1Q9H6P5 420 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SNX12Q9UMY4 172 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC6A14Q9UN76 642 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 AGAP1Q9UPQ3 857 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 SAR1BQ9Y6B6 198 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 ASXL3Q9C0F0 2248 aa10.99□□□□□ -0.65
PDLIM5-217ENST00000512274 URB1O60287 2271 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 IGSF10Q6WRI0 2623 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 MACROD2A1Z1Q3 448 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 GRID2IPA4D2P6 1211 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TK2O00142 265 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TNFRSF10BO14763 440 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 PPEF2O14830 753 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 ATXN7O15265 892 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 VDRP11473 427 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 USP8P40818 1118 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TAF6P49848 677 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 RAD23BP54727 409 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TNNC1P63316 161 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 PLD1Q13393 1074 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 CNGA2Q16280 664 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 SV2CQ496J9 727 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 C2orf27AQ580R0 203 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 SLCO6A1Q86UG4 719 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 MCOLN2Q8IZK6 566 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 CRYBG2Q8N1P7 616 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TTC9BQ8N6N2 239 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC4A11Q8NBS3 891 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 ZNF592Q92610 1267 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 CD101Q93033 1021 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TLR10Q9BXR5 811 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 SLC46A2Q9BY10 475 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 MIS12Q9H081 205 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TAS2R14Q9NYV8 317 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 CCL26Q9Y258 94 aa10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 TIMM13Q9Y5L4 95 aaPredicted RBP10.98□□□□□ -0.65
PDLIM5-217ENST00000512274 DENND4CQ5VZ89 1909 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 ITPR1Q14643 2758 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 EFCAB8A8MWE9 144 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MIF4GDA9UHW6 222 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 URI1O94763 535 aaPredicted RBP10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MOCS3O95396 460 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 KRT19P08727 400 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 SETSIPP0DME0 302 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 MMP8P22894 467 aa10.97□□□□□ -0.65
PDLIM5-217ENST00000512274 ITPKBP27987 946 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms