RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC15A3Q8IY34 581 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 ABRAQ8N0Z2 381 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 DEFB123Q8N688 67 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 HPS3Q969F9 1004 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 P2RX7Q99572 595 aaKnown RBP7.86□□□□□ -1.15
USP53-206ENST00000510737 CGRRF1Q99675 332 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 CIPCQ9C0C6 399 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 NYXQ9GZU5 481 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 TMX4Q9H1E5 349 aaPredicted RBP7.86□□□□□ -1.15
USP53-206ENST00000510737 TRNAU1APQ9NX07 287 aaKnown RBP7.86□□□□□ -1.15
USP53-206ENST00000510737 MTMR10Q9NXD2 777 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 CPA4Q9UI42 421 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 MED16Q9Y2X0 877 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 UBR2Q8IWV8 1755 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 KIAA0100Q14667 2235 aaKnown RBP7.86□□□□□ -1.15
USP53-206ENST00000510737 RIC1Q4ADV7 1423 aa7.86□□□□□ -1.15
USP53-206ENST00000510737 A0A1W2PPC1 479 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 AP4M1O00189 453 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 HMOX1P09601 288 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 RPS12P25398 132 aaKnown RBP7.85□□□□□ -1.15
USP53-206ENST00000510737 PSG6Q00889 435 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 E2F1Q01094 437 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 TBC1D25Q3MII6 688 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 OSCP1Q8WVF1 389 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 ERO1AQ96HE7 468 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 CDK5RAP3Q96JB5 506 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 MOGAT1Q96PD6 335 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 PRR25Q96S07 402 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 DBNDD1Q9H9R9 158 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 SARS2Q9NP81 518 aaKnown RBP7.85□□□□□ -1.15
USP53-206ENST00000510737 STAP2Q9UGK3 403 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 EYSQ5T1H1 3165 aa7.85□□□□□ -1.15
USP53-206ENST00000510737 ABCC4O15439 1325 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 BBOX1O75936 387 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 AKAP5P24588 427 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 DGKEP52429 567 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 GTF2H3Q13889 308 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 PXDC1Q5TGL8 231 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 IRF2BP2Q7Z5L9 587 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 UBE2Q1Q7Z7E8 422 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 CAND1Q86VP6 1230 aaKnown RBP7.84□□□□□ -1.15
USP53-206ENST00000510737 NANOGP1Q8N7R0 232 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 COQ8BQ96D53 544 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 TMX2Q9Y320 296 aa7.84□□□□□ -1.15
USP53-206ENST00000510737 RTL9Q8NET4 1388 aa7.84□□□□□ -1.16
USP53-206ENST00000510737 UBN2Q6ZU65 1347 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 ADAM10O14672 748 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 CHRM5P08912 532 aaPredicted RBP7.83□□□□□ -1.16
USP53-206ENST00000510737 GPTP24298 496 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 IL1R2P27930 398 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 LRPAP1P30533 357 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 SP3Q02447 781 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 TEFQ10587 303 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 SLC9C1Q4G0N8 1177 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 BRDTQ58F21 947 aaPredicted RBP7.83□□□□□ -1.16
USP53-206ENST00000510737 SLC10A5Q5PT55 438 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 ATAT1Q5SQI0 421 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 BCDIN3DQ7Z5W3 292 aaKnown RBP7.83□□□□□ -1.16
USP53-206ENST00000510737 IZUMO1Q8IYV9 350 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 ZNF609O15014 1411 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 MUC3AQ02505 3323 aa7.83□□□□□ -1.16
USP53-206ENST00000510737 USP1O94782 785 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 NTSR2O95665 410 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 ZNF267Q14586 743 aaPredicted RBP7.82□□□□□ -1.16
USP53-206ENST00000510737 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 ZNF34Q8IZ26 560 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 NGEFQ8N5V2 710 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 TMEM171Q8WVE6 324 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 MMS19Q96T76 1030 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 EFHD1Q9BUP0 239 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 TCF7L1Q9HCS4 588 aa7.82□□□□□ -1.16
USP53-206ENST00000510737 ERVV-1B6SEH8 477 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 DLDP09622 509 aaKnown RBP7.81□□□□□ -1.16
USP53-206ENST00000510737 HOXD9P28356 352 aaPredicted RBP7.81□□□□□ -1.16
USP53-206ENST00000510737 POLGP54098 1239 aaPredicted RBP7.81□□□□□ -1.16
USP53-206ENST00000510737 RAB1AP62820 205 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 PRKG1Q13976 671 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 CERKLQ49MI3 558 aaPredicted RBP7.81□□□□□ -1.16
USP53-206ENST00000510737 MTHFD1LQ6UB35 978 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 SERPINA13PQ6UXR4 307 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 ZNF813Q6ZN06 617 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 SAMD14Q8IZD0 417 aaPredicted RBP7.81□□□□□ -1.16
USP53-206ENST00000510737 CHMP4CQ96CF2 233 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 PCDH12Q9NPG4 1184 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 POLLQ9UGP5 575 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 KDM3BQ7LBC6 1761 aa7.81□□□□□ -1.16
USP53-206ENST00000510737 A0A087WWL8 130 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 SOCS2O14508 198 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 ECE2O60344 883 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 CCKBRP32239 447 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 ARFIP2P53365 341 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 WNT3P56703 355 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 FAM187BQ17R55 369 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 PTCHD3Q3KNS1 767 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 KLHL22Q53GT1 634 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 AWAT1Q58HT5 328 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 RUSC1-AS1Q66K80 236 aa7.8□□□□□ -1.16
USP53-206ENST00000510737 SHC4Q6S5L8 630 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms