RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 MPP7Q5T2T1 576 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 PIK3R6Q5UE93 754 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 OTUD1Q5VV17 481 aaPredicted RBP12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 TRNP1Q6NT89 227 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 BNIPLQ7Z465 357 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 IL17RCQ8NAC3 791 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 RPLP0P6Q8NHW5 317 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 MYEOVQ96EZ4 313 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 XPO6Q96QU8 1125 aaKnown RBP12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 NPY6RQ99463 290 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC2A11Q9BYW1 496 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 DNAJC17Q9NVM6 304 aaKnown RBP12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
HMGXB3-203ENST00000510472 CCDC163A0A0D9SF12 145 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 DAB1O75553 588 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 GRAP2O75791 330 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 FERP16591 822 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 HOXD9P28356 352 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC11A2P49281 568 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 SGSHP51688 502 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 NRLP54845 237 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 GSCP56915 257 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 UBASH3AP57075 661 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 TPM4P67936 248 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 CENPCQ03188 943 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 KDSRQ06136 332 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 DMWDQ09019 674 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 PPP2R5DQ14738 602 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 CLEC16AQ2KHT3 1053 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 HSF5Q4G112 596 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 MPPE1Q53F39 396 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 C2CD6Q53TS8 623 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 C2orf27AQ580R0 203 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 ZC3H12AQ5D1E8 599 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 E4F1Q66K89 784 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 GRAMD4Q6IC98 578 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 CACNA2D4Q7Z3S7 1137 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 KIAA0907Q7Z7F0 614 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 SLC30A5Q8TAD4 765 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 TMA16Q96EY4 203 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 PGAP3Q96FM1 320 aaPredicted RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 LMLNQ96KR4 655 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 AGPAT1Q99943 283 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 SEMA4AQ9H3S1 761 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 RRN3Q9NYV6 651 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 XPO7Q9UIA9 1087 aaKnown RBP12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 R4GN57 208 aa12.21□□□□□ -0.45
HMGXB3-203ENST00000510472 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.46
HMGXB3-203ENST00000510472 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 TCRBV5S1A1TA0A578 114 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 ADAM23O75077 832 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 HNRNPLP14866 589 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 TFE3P19532 575 aaPredicted RBP12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 FLT3P36888 993 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 PRKCIP41743 596 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 DGKGP49619 791 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 SEC13P55735 322 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 ARID5AQ03989 594 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 DMC1Q14565 340 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 ARTNQ5T4W7 220 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 RFWD3Q6PCD5 774 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 MMS22LQ6ZRQ5 1243 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 SUMF1Q8NBK3 374 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 DDI1Q8WTU0 396 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 BHMTQ93088 406 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 ACDQ96AP0 544 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 BTN2A3PQ96KV6 586 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 PRICKLE1Q96MT3 831 aaPredicted RBP12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 PRMT1Q99873 361 aaKnown RBP12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 SYNCQ9H7C4 482 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 CD248Q9HCU0 757 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 EBF1Q9UH73 591 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 MMP17Q9ULZ9 603 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 MYO16Q9Y6X6 1858 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 MYOFQ9NZM1 2061 aa12.2□□□□□ -0.46
HMGXB3-203ENST00000510472 MIA3Q5JRA6 1907 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 A0A1W2PQJ5 194 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 LRRC53A6NM62 1247 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 SGK1O00141 431 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 HRO43593 1189 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 TSPAN3O60637 253 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 ENDOD1O94919 500 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 CYBBP04839 570 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 CCDC172P0C7W6 258 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 SLC2A3P11169 496 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 HLA-FP30511 346 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 GBP1P32455 592 aa12.19□□□□□ -0.46
HMGXB3-203ENST00000510472 TIE1P35590 1138 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms