RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 SLC7A14Q8TBB6 771 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 FBF1Q8TES7 1133 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 MTBPQ96DY7 904 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 SEC16BQ96JE7 1060 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 CAPNS2Q96L46 248 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ZIC5Q96T25 663 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 PAFAH2Q99487 392 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 PRMT1Q99873 361 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 RTP3Q9BQQ7 232 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ADAM33Q9BZ11 813 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.55□□□□□ -0.88
HTT-205ENST00000509043 OSBPL2Q9H1P3 480 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 ACTR5Q9H9F9 607 aaPredicted RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 ETNK1Q9HBU6 452 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 CREBZFQ9NS37 354 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 PIGVQ9NUD9 493 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 TRMT13Q9NUP7 481 aaKnown RBP9.55□□□□□ -0.88
HTT-205ENST00000509043 FNIP2Q9P278 1114 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 TRHDEQ9UKU6 1024 aa9.55□□□□□ -0.88
HTT-205ENST00000509043 YJEFN3A6XGL0 299 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 E7ENQ6 273 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 POC1B-GALNT4F8VUJ3 575 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 NRP1O14786 923 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SYN3O14994 580 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 DCLK1O15075 740 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 PSMD3O43242 534 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 HOXA2O43364 376 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 PARNO95453 639 aaKnown RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 CPP00450 1065 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 POMCP01189 267 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 FYNP06241 537 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 APRTP07741 180 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 INHBAP08476 426 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 VIMP08670 466 aaKnown RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 AMPD1P23109 780 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 PRKCHP24723 683 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 DNAJB2P25686 324 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 CNTFP26441 200 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 NDUFV1P49821 464 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SERPINB9P50453 376 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 AFF1P51825 1210 aaKnown RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 TPI1P60174 286 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 YWHAHQ04917 246 aaPredicted RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 NME3Q13232 169 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 MTA1Q13330 715 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 BFSP2Q13515 415 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 FRG1Q14331 258 aaKnown RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 NOMO2Q5JPE7 1267 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ANKRD20A2Q5SQ80 823 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ANKRD20A1Q5TYW2 823 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ANKRD20A3Q5VUR7 823 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SYPL2Q5VXT5 272 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ARMC3Q5W041 872 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 CD300LGQ6UXG3 332 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 CCDC121Q6ZUS5 278 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SLC26A11Q86WA9 606 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 LRRC49Q8IUZ0 686 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ANKMY2Q8IV38 441 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 LZTR1Q8N653 840 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 GBP7Q8N8V2 638 aaPredicted RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 DENND1AQ8TEH3 1009 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 SLC44A1Q8WWI5 657 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 PPM1EQ8WY54 764 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 HAPLN3Q96S86 360 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 WDCPQ9H6R7 721 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 C10orf88Q9H8K7 445 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 STARD7Q9NQZ5 370 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ABCC13Q9NSE7 274 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 COMMD8Q9NX08 183 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 DDIT4Q9NX09 232 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 TMEM161AQ9NX61 479 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 DONSONQ9NYP3 566 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 IGSF9Q9P2J2 1179 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 CTNNAL1Q9UBT7 734 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 ZC3H7BQ9UGR2 993 aaKnown RBP9.54□□□□□ -0.88
HTT-205ENST00000509043 TBK1Q9UHD2 729 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
HTT-205ENST00000509043 A0A1W2PQ45 241 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 A0A1W2PQY0 241 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 TCRBV7S3A2A0A539 114 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 TCRBV9S1A1TA0A576 114 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 OR6C75A6NL08 312 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 KBTBD13C9JR72 458 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 MYO1CO00159 1063 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 ARVCFO00192 962 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 TRIM66O15016 1216 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 FGF10O15520 208 aaPredicted RBP9.53□□□□□ -0.88
HTT-205ENST00000509043 KRT37O76014 449 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 SUN1O94901 812 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 IGLV3-25P01717 112 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 USP17L7P0C7H9 530 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 SLC2A3P11169 496 aa9.53□□□□□ -0.88
HTT-205ENST00000509043 SELPP16109 830 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms