RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ENGP17813 658 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 ITPKAP23677 461 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 CD6P30203 668 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 ACADSBP45954 432 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 DAOAP59103 153 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 RING1Q06587 406 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 LRMPQ12912 555 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 PKDCCQ504Y2 493 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 SH3PXD2AQ5TCZ1 1133 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 TTI2Q6NXR4 508 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 MSANTD2Q6P1R3 559 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 KIAA1324Q6UXG2 1013 aaKnown RBP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 ARMCX6Q7L4S7 300 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 CCDC117Q8IWD4 279 aaPredicted RBP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 UBA3Q8TBC4 463 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 SLC35F5Q8WV83 523 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 PRCCQ92733 491 aaPredicted RBP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 TMA16Q96EY4 203 aaKnown RBP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 ACOX2Q99424 681 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 PCED1AQ9H1Q7 454 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 ITM2CQ9NQX7 267 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 CYP8B1Q9UNU6 501 aa14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCHCR1-227ENST00000508852 YJEFN3A6XGL0 299 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 PATE3B3GLJ2 98 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 E7ENQ6 273 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 OPHN1O60890 802 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 AFPP02771 609 aaKnown RBP14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 ATP5BP06576 529 aaKnown RBP14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 LCP1P13796 627 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 PAK1Q13153 545 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 SLC14A1Q13336 389 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 NNTQ13423 1086 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 MORC3Q14149 939 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 GEN1Q17RS7 908 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 UAP1L1Q3KQV9 507 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 KLHL10Q6JEL2 608 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 KIAA1211LQ6NV74 962 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 BEND5Q7L4P6 421 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 BHLHA9Q7RTU4 235 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 RGL4Q8IZJ4 473 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 AHI1Q8N157 1196 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 SIPA1Q96FS4 1042 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 NUP58Q9BVL2 599 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 CIPCQ9C0C6 399 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 TMEM74BQ9NUR3 256 aa14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 USP36Q9P275 1121 aaKnown RBP14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCHCR1-227ENST00000508852 CKAP5Q14008 2032 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 GON4LQ3T8J9 2241 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 EPG5Q9HCE0 2579 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 PPP1R3GB7ZBB8 358 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 M0QYV0 167 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 TULP2O00295 520 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 IGLV3-19P01714 112 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 LTFP02788 710 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 IL12RB1P42701 662 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ZBTB16Q05516 673 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ZNF252P-AS1Q0IIN9 211 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 KCNH2Q12809 1159 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 MTA1Q13330 715 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ZNF234Q14588 700 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ST3GAL2Q16842 350 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 FUT11Q495W5 492 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 SERPINA13PQ6UXR4 307 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 TMPRSS6Q8IU80 811 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 FRMD1Q8N878 549 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 RBBP8NLQ8NC74 664 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 STK32AQ8WU08 396 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 EDEM1Q92611 657 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 ERCC4Q92889 916 aaPredicted RBP14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 HSPA12BQ96MM6 686 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 SERPINB11Q96P15 392 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 CAPN10Q9HC96 672 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 SUN2Q9UH99 717 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 RAD54BQ9Y620 910 aa14.17□□□□□ -0.14
CCHCR1-227ENST00000508852 H0Y626 953 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 TRIM16O95361 564 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 EPHX1P07099 455 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 NCAM1P13591 858 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 HOXD9P28356 352 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 MAPK8P45983 427 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 SNX16P57768 344 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 ISM2Q6H9L7 571 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 PMF1Q6P1K2 205 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 LMO3Q8TAP4 145 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 DNASE2BQ8WZ79 361 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 MED15Q96RN5 788 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 DNAAF2Q9NVR5 837 aaKnown RBP14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 WSB2Q9NYS7 404 aaPredicted RBP14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 SFMBT1Q9UHJ3 866 aa14.16□□□□□ -0.14
CCHCR1-227ENST00000508852 CNTN6Q9UQ52 1028 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms