RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 SIX6OS1Q8N1H7 587 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 RNF139Q8WU17 664 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 MRGPRX1Q96LB2 322 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 INTS2Q9H0H0 1204 aaKnown RBP16.93■□□□□ 0.3
LMNA-222ENST00000508500 KIAA1468Q9P260 1216 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 THAP10Q9P2Z0 257 aaPredicted RBP16.93■□□□□ 0.3
LMNA-222ENST00000508500 WASF3Q9UPY6 502 aa16.93■□□□□ 0.3
LMNA-222ENST00000508500 KHNYNO15037 678 aaKnown RBP16.92■□□□□ 0.3
LMNA-222ENST00000508500 GNA14O95837 355 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 IGLV3-27P01718 113 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 GPD2P43304 727 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 SPDYCQ5MJ68 293 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 SDE2Q6IQ49 451 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 GJB7Q6PEY0 223 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 IRF2BP1Q8IU81 584 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 SLC41A1Q8IVJ1 513 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 DDI1Q8WTU0 396 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 SORCS1Q8WY21 1168 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 IRGQQ8WZA9 623 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 ACP6Q9NPH0 428 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 EVLQ9UI08 416 aaPredicted RBP16.92■□□□□ 0.3
LMNA-222ENST00000508500 CYTH4Q9UIA0 394 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 PILRBQ9UKJ0 227 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 ANGPTL2Q9UKU9 493 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 CYP8B1Q9UNU6 501 aa16.92■□□□□ 0.3
LMNA-222ENST00000508500 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
LMNA-222ENST00000508500 KNL1Q8NG31 2342 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 GOLGA6L7A0A1B0GV03 622 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 KCNK5O95279 499 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 HLA-FP30511 346 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 APBA1Q02410 837 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 RPL6Q02878 288 aaKnown RBP16.91■□□□□ 0.3
LMNA-222ENST00000508500 CETN1Q12798 172 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 BYSLQ13895 437 aaKnown RBP16.91■□□□□ 0.3
LMNA-222ENST00000508500 ZNF234Q14588 700 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 STILQ15468 1287 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 FUT11Q495W5 492 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 MPPE1Q53F39 396 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 LYSMD4Q5XG99 296 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 DENND1BQ6P3S1 775 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 SYT12Q8IV01 421 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 HSFY1Q96LI6 401 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 SLC2A11Q9BYW1 496 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 MKRN2Q9H000 416 aaKnown RBP16.91■□□□□ 0.3
LMNA-222ENST00000508500 MIS12Q9H081 205 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 FSCN3Q9NQT6 498 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
LMNA-222ENST00000508500 TP53BP1Q12888 1972 aaPredicted RBP16.91■□□□□ 0.3
LMNA-222ENST00000508500 BECN2A8MW95 431 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 GIPC1O14908 333 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 LTFP02788 710 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 CYBBP04839 570 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 SLC9A1P19634 815 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 KCNA4P22459 653 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 PRKCHP24723 683 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 SLC6A4P31645 630 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 HARS2P49590 506 aaKnown RBP16.9■□□□□ 0.3
LMNA-222ENST00000508500 UBE2HP62256 183 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 FAM133BQ5BKY9 247 aaKnown RBP16.9■□□□□ 0.3
LMNA-222ENST00000508500 TRIM61Q5EBN2 209 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 SLC23A3Q6PIS1 610 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 ANKS1BQ7Z6G8 1248 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 KIAA0907Q7Z7F0 614 aaPredicted RBP16.9■□□□□ 0.3
LMNA-222ENST00000508500 SCUBE3Q8IX30 993 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 WFDC5Q8TCV5 224 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 MYEOVQ96EZ4 313 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 UBE2TQ9NPD8 197 aaPredicted RBP16.9■□□□□ 0.3
LMNA-222ENST00000508500 RWDD2AQ9UIY3 292 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 TMEM131Q92545 1883 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 SPEGQ15772 3267 aa16.9■□□□□ 0.3
LMNA-222ENST00000508500 KCNJ18B7U540 433 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 AP5Z1O43299 807 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 ZNF217O75362 1048 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 LATS1O95835 1130 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 COPAP53621 1224 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 ZNF33AQ06730 810 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 ADGRF1Q5T601 910 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 NADSYN1Q6IA69 706 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 RFWD3Q6PCD5 774 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 SLC36A4Q6YBV0 504 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
LMNA-222ENST00000508500 SLC4A5Q9BY07 1137 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 TMEM9BQ9NQ34 198 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
LMNA-222ENST00000508500 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 AKAP13Q12802 2813 aa16.89■□□□□ 0.29
LMNA-222ENST00000508500 NCAM1P13591 858 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 HLA-EP13747 358 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
LMNA-222ENST00000508500 PIK3R6Q5UE93 754 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 SYPL2Q5VXT5 272 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 TRIM65Q6PJ69 517 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 KIAA1324Q6UXG2 1013 aaKnown RBP16.88■□□□□ 0.29
LMNA-222ENST00000508500 METTL3Q86U44 580 aaKnown RBP16.88■□□□□ 0.29
LMNA-222ENST00000508500 ADIPOR2Q86V24 386 aa16.88■□□□□ 0.29
LMNA-222ENST00000508500 DQX1Q8TE96 717 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms