RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 HHIPQ96QV1 700 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 HINFPQ9BQA5 517 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
SFXN1-209ENST00000508290 SLC12A6Q9UHW9 1150 aa20.68■□□□□ 0.9
SFXN1-209ENST00000508290 HRO43593 1189 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 FOXD2O60548 495 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 LRP3O75074 770 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 RETP07949 1114 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 CCDC172P0C7W6 258 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 PNMA6AP0CW24 399 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 HNRNPLP14866 589 aaKnown RBP eCLIP20.67■□□□□ 0.95e-33■■■■□ 19.7
SFXN1-209ENST00000508290 SOX5P35711 763 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 JAM2P57087 298 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 BYSLQ13895 437 aaKnown RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 SKOR2Q2VWA4 1001 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 FILIP1LQ4L180 1135 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 OLFML1Q6UWY5 402 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 TRIM72Q6ZMU5 477 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 CACNA2D4Q7Z3S7 1137 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 CCDC33Q8N5R6 958 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 EPS8L1Q8TE68 723 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 DDX1Q92499 740 aaKnown RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 BHMTQ93088 406 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 LOXL4Q96JB6 756 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 FCRL2Q96LA5 508 aaPredicted RBP20.67■□□□□ 0.9
SFXN1-209ENST00000508290 HSD3B7Q9H2F3 369 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 PLK2Q9NYY3 685 aa20.67■□□□□ 0.9
SFXN1-209ENST00000508290 USP34Q70CQ2 3546 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 TRUB2O95900 331 aaKnown RBP20.66■□□□□ 0.9
SFXN1-209ENST00000508290 GABRB2P47870 512 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 TPM4P67936 248 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 SLC6A3Q01959 620 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 PTPN20Q4JDL3 420 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 USP39Q53GS9 565 aaKnown RBP20.66■□□□□ 0.9
SFXN1-209ENST00000508290 DCAF6Q58WW2 860 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 SYPL2Q5VXT5 272 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 OR6B2Q6IFH4 312 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 PRR23BQ6ZRT6 265 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 APTXQ7Z2E3 356 aaKnown RBP20.66■□□□□ 0.9
SFXN1-209ENST00000508290 TAC4Q86UU9 113 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 CHPFQ8IZ52 775 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 HJURPQ8NCD3 748 aaPredicted RBP20.66■□□□□ 0.9
SFXN1-209ENST00000508290 WFIKKN2Q8TEU8 576 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 C18orf8Q96DM3 657 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 BTN2A3PQ96KV6 586 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 PAXBP1Q9Y5B6 917 aa20.66■□□□□ 0.9
SFXN1-209ENST00000508290 SGK1O00141 431 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 DAB1O75553 588 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 ERBB2P04626 1255 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 HOXD9P28356 352 aaPredicted RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 CCR1P32246 355 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 NOS2P35228 1153 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 CDR2Q01850 454 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 RNF43Q68DV7 783 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 FAM183BPQ6ZVS7 135 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 NOP9Q86U38 636 aaKnown RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 ERICH1Q86X53 443 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 CCDC117Q8IWD4 279 aaPredicted RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 ATP6V0D2Q8N8Y2 350 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 PIWIL1Q96J94 861 aaKnown RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 ZC3H10Q96K80 434 aaKnown RBP20.65■□□□□ 0.9
SFXN1-209ENST00000508290 GABRG3Q99928 467 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 FAM204AQ9H8W3 233 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 STAP1Q9ULZ2 295 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 MYO6Q9UM54 1294 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 VPS13AQ96RL7 3174 aa20.65■□□□□ 0.9
SFXN1-209ENST00000508290 RIF1Q5UIP0 2472 aaKnown RBP20.64■□□□□ 0.9
SFXN1-209ENST00000508290 PRRT4C9JH25 899 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 TRIM24O15164 1050 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ADAM23O75077 832 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 GFPT2O94808 682 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 HOXB2P14652 356 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ABCB4P21439 1286 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 MATKP42679 507 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 PXNP49023 591 aaPredicted RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 EIF4EBP2Q13542 120 aaPredicted RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ELF2Q15723 593 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 FAM133BQ5BKY9 247 aaKnown RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ACBD5Q5T8D3 534 aaPredicted RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 EMC10Q5UCC4 262 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 PIK3R6Q5UE93 754 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ANO7Q6IWH7 933 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 ARCQ7LC44 396 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 SFTPA1Q8IWL2 248 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 DHX40Q8IX18 779 aaKnown RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 DEFB106AQ8N104 65 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 FUCA2Q9BTY2 467 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 NLRC4Q9NPP4 1024 aa20.64■□□□□ 0.89
SFXN1-209ENST00000508290 NOCTQ9UK39 431 aaKnown RBP20.64■□□□□ 0.89
SFXN1-209ENST00000508290 DMDP11532 3685 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 F9P00740 461 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 ATP1A3P13637 1013 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 KLK7P49862 253 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 STARD3Q14849 445 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 TTC39BQ5VTQ0 682 aaPredicted RBP20.63■□□□□ 0.89
SFXN1-209ENST00000508290 TAF3Q5VWG9 929 aa20.63■□□□□ 0.89
SFXN1-209ENST00000508290 EGFLAMQ63HQ2 1017 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms