RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 LETM1O95202 739 aaPredicted RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 TPM2P07951 284 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 FAM200BP0CF97 657 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ADH5P11766 374 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 HOXB2P14652 356 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 HDCP19113 662 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 EEF1GP26641 437 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 CDH8P55286 799 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 CLDN6P56747 220 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 BYSLQ13895 437 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 STILQ15468 1287 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 DPCR1Q3MIW9 517 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ZNF605Q86T29 641 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 PGBD3Q8N328 593 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ZCCHC9Q8N567 271 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ZNF513Q8N8E2 541 aaPredicted RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 TERB1Q8NA31 727 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ANKRD20A12PQ8NF67 263 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ENOX1Q8TC92 643 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 SEMA4DQ92854 862 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 WBP2Q969T9 261 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 GABRG3Q99928 467 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 MED10Q9BTT4 135 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 SEMA4CQ9C0C4 833 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 NAT10Q9H0A0 1025 aaKnown RBP9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 FBXO44Q9H4M3 255 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 CPQQ9Y646 472 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 KNTC1P50748 2209 aa9.68□□□□□ -0.86
UBE2D3-223ENST00000508249 ZNF840PA6NDX5 716 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 F8VP50 259 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 PYCARD-AS1I3L0S3 204 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 PLK4O00444 970 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 HOXC11O43248 304 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 TULP3O75386 442 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 AP1G2O75843 785 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 PAEPP09466 180 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 WASP42768 502 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 LY6G5CQ5SRR4 150 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 ARHGAP17Q68EM7 881 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 GBP6Q6ZN66 633 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 ACOT1Q86TX2 421 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 IPO4Q8TEX9 1081 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 TMEM176AQ96HP8 235 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 MRGPRX1Q96LB2 322 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 FCRL3Q96P31 734 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 B3GNT5Q9BYG0 378 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 UBXN6Q9BZV1 441 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 ZDHHC5Q9C0B5 715 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 GAREM1Q9H706 876 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 CSNK1G1Q9HCP0 422 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 TM7SF3Q9NS93 570 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 SMPD4Q9NXE4 827 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 TRPM5Q9NZQ8 1165 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 STARD13Q9Y3M8 1113 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 NFE2L3Q9Y4A8 694 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 DAAM1Q9Y4D1 1078 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 RAD54BQ9Y620 910 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 COL27A1Q8IZC6 1860 aaPredicted RBP9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 FLNCQ14315 2725 aa9.67□□□□□ -0.86
UBE2D3-223ENST00000508249 A0A1B0GTW7 788 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 FAM92AA1XBS5 289 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 PRRT4C9JH25 899 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 GREM1O60565 184 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 CD58P19256 250 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 YWHAQP27348 245 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 NTSR1P30989 418 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 TUBP50607 506 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 CACNA2D1P54289 1103 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 SRSF1Q07955 248 aaKnown RBP eCLIP9.66□□□□□ -0.862e-8■□□□□ 10.6
UBE2D3-223ENST00000508249 MEA1Q16626 185 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 EXOC3L4Q17RC7 722 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 DDX42Q86XP3 938 aaKnown RBP eCLIP9.66□□□□□ -0.864e-7■■■□□ 18.4
UBE2D3-223ENST00000508249 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 PPM1KQ8N3J5 372 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 GALNT15Q8N3T1 639 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 SLC2A14Q8TDB8 520 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 SETD7Q8WTS6 366 aaKnown RBP9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 PRDM16Q9HAZ2 1276 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 KRT82Q9NSB4 513 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 IL37Q9NZH6 218 aa9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 USP36Q9P275 1121 aaKnown RBP9.66□□□□□ -0.86
UBE2D3-223ENST00000508249 CFAP97Q9P2B7 532 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms