RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PPM1JQ5JR12 505 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PDPK2PQ6A1A2 396 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 MPZL3Q6UWV2 235 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 TIFABQ6ZNK6 161 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 FRMD7Q6ZUT3 714 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 TRIM50Q86XT4 487 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 ACTRT2Q8TDY3 377 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 NAT14Q8WUY8 206 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 HAPLN3Q96S86 360 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 MOCS1Q9NZB8 636 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PACSIN3Q9UKS6 424 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 ITGA11Q9UKX5 1188 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PSAT1Q9Y617 370 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 H3BNX3 289 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 ZNF195O14628 629 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PABPC4LP0CB38 370 aaKnown RBP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PROZP22891 400 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 LSAMPQ13449 338 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 GRM2Q14416 872 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PDK3Q15120 406 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PDCD2Q16342 344 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 OLFM3Q96PB7 478 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 OXCT2Q9BYC2 517 aaPredicted RBP13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 XPNPEP3Q9NQH7 507 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 PTPRFP10586 1907 aa13.84□□□□□ -0.19
SNCAIP-209ENST00000508017 ICAM3P32942 547 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 PDK2Q15119 407 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 MMEL1Q495T6 779 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 C12orf29Q8N999 325 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 NLRP4Q96MN2 994 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 VCX3BQ9H321 246 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 PTPRHQ9HD43 1115 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 VCX3AQ9NNX9 186 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 ZNF358Q9NW07 568 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 MFHAS1Q9Y4C4 1052 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 SLC4A7Q9Y6M7 1214 aa13.83□□□□□ -0.19
SNCAIP-209ENST00000508017 INO80B-WBP1J3KQ70 363 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 PGM3O95394 542 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 SERPINE1P05121 402 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 PFKMP08237 780 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 F7P08709 466 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 PIM1P11309 404 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 CYP2F1P24903 491 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 ATXN1P54253 815 aaKnown RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 CXCL9Q07325 125 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 TBL3Q12788 808 aaKnown RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 GRAMD1BQ3KR37 738 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 JADE1Q6IE81 842 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 UGT2A3Q6UWM9 527 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 PACS1Q6VY07 963 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 AGBL3Q8NEM8 1001 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 TRAPPC12Q8WVT3 735 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 PGLYRP2Q96PD5 576 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 GCNAQ96QF7 691 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 SIKE1Q9BRV8 207 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 INO80BQ9C086 356 aaPredicted RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 CDT1Q9H211 546 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 NRDE2Q9H7Z3 1164 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 MAN1C1Q9NR34 630 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 TMEM216Q9P0N5 145 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 TSPAN16Q9UKR8 245 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 ADAMTS5Q9UNA0 930 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 COMMD3-BMI1R4GMX3 469 aa13.83□□□□□ -0.2
SNCAIP-209ENST00000508017 CAPN8A6NHC0 703 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 LACTBL1A8MY62 500 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 DCXO43602 365 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 ZBTB14O43829 449 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 GLRA3O75311 464 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 APBA3O96018 575 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 TPSB2P20231 275 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 NDST1P52848 882 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 OAZ1P54368 228 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 NIPAL4Q0D2K0 466 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 TPSAB1Q15661 275 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 NBPF12Q5TAG4 269 aaPredicted RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 IER5Q5VY09 327 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 TSHZ1Q6ZSZ6 1077 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 NETO2Q8NC67 525 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 NMD3Q96D46 503 aaKnown RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 CLMNQ96JQ2 1002 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 GBA2Q9HCG7 927 aaPredicted RBP13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 PCDHGB4Q9UN71 923 aa13.82□□□□□ -0.2
SNCAIP-209ENST00000508017 PCDHGB5Q9Y5G0 923 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms