RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 LOC102723532A0A0G2JNH3 316 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANKRD18BA2A2Z9 1011 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3BA6NDS4 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3FA6NER0 549 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3LB9A6J9 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 K7ENM7 598 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 KLK10O43240 276 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 HNRNPRO43390 633 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 VNN1O95497 513 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ONECUT2O95948 504 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3HP0C7X1 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PPP3CBP16298 524 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 THBS4P35443 961 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PSMC2P35998 433 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 HNRNPMP52272 730 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 CLNS1AP54105 237 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM189BP81408 668 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 RNASELQ05823 741 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 EIF2B5Q13144 721 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 BFSP2Q13515 415 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 CBFBQ13951 182 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 DCTN1Q14203 1278 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 BAK1Q16611 211 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 AAK1Q2M2I8 961 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 BEAN1Q3B7T3 259 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 AASDHQ4L235 1098 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF484Q5JVG2 852 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC9C2Q5TAH2 1124 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM90A2PQ658T7 463 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ANKRD40Q6AI12 368 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3GQ6DHY5 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TTLL5Q6EMB2 1281 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ITPRIPL1Q6GPH6 555 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3CQ6IPX1 549 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 LRRC8DQ7L1W4 858 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMPRSS6Q8IU80 811 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D3Q8IZP1 549 aaPredicted RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 OR4N4Q8N0Y3 316 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PDILTQ8N807 584 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 FAM71DQ8N9W8 422 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 CPEB3Q8NE35 698 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 STAMQ92783 540 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 RNF125Q96EQ8 232 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PTCD3Q96EY7 689 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PIGSQ96S52 555 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ADOQ96SZ5 270 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 AGXT2Q9BYV1 514 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF768Q9H5H4 540 aaKnown RBP3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 NRDE2Q9H7Z3 1164 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 ACAD9Q9H845 621 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PLEKHA2Q9HB19 425 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 NRBP1Q9UHY1 535 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 PCDHA10Q9Y5I2 948 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 CYP46A1Q9Y6A2 500 aa3.59□□□□□ -1.83
TRAPPC11-205ENST00000506426 UHRF1BP1Q6BDS2 1440 aa3.59□□□□□ -1.84
TRAPPC11-205ENST00000506426 SYCP2Q9BX26 1530 aa3.59□□□□□ -1.84
TRAPPC11-205ENST00000506426 LRRIQ1Q96JM4 1722 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 MYO5CQ9NQX4 1742 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 A0A1W2PPH5 198 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 OTOL1A6NHN0 477 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 MBD3L5A6NJ08 208 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 NKX2-8O15522 239 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ANP32CO43423 234 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TIMM44O43615 452 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 FAM20BO75063 409 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZBED4O75132 1171 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 GUCY1B2O75343 617 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PMPCBO75439 489 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TMEM63AO94886 807 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 RTN3O95197 1032 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ERBB2P04626 1255 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PDHA1P08559 390 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 CYP21A2P08686 494 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TNNT1P13805 278 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 CREB1P16220 341 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF37AP17032 561 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 LAG3P18627 525 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ADRA1DP25100 572 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ACRV1P26436 265 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 GKP32189 559 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PCP4P48539 62 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 RPL15P61313 204 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SUMO2P61956 95 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 PRKG2Q13237 762 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TOB2Q14106 344 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 KRT32Q14532 448 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SF3B3Q15393 1217 aaKnown RBP3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 GPR68Q15743 365 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TBCCQ15814 346 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 NBPF8Q3BBV2 869 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 NRN1LQ496H8 165 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 CBWD5Q5RIA9 395 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 TREML2Q5T2D2 321 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ZNF618Q5T7W0 954 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SPATA1Q5VX52 437 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 LIPMQ5VYY2 423 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 GRHL2Q6ISB3 625 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 SYNE3Q6ZMZ3 975 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 NEK10Q6ZWH5 1172 aa3.58□□□□□ -1.84
TRAPPC11-205ENST00000506426 ARMC8Q8IUR7 673 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms