RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HMOX2P30519 316 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PHKA2P46019 1235 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 DYNLT1P63172 113 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 CHERPQ8IWX8 916 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 UBR7Q8N806 425 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 CMASQ8NFW8 434 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 CNDP1Q96KN2 507 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PRMT6Q96LA8 375 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF395Q9H8N7 513 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 TMEM165Q9HC07 324 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 MYOZ2Q9NPC6 264 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 POLR2AP24928 1970 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 DHX15O43143 795 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 CFHP08603 1231 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 TTKP33981 857 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 NUMBP49757 651 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 AP3M2P53677 418 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF280AP59817 542 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ESRRGP62508 458 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 TDRD10Q5VZ19 366 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 IYDQ6PHW0 289 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 BNC2Q6ZN30 1099 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 RFX6Q8HWS3 928 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ADGRF2Q8IZF7 708 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 HIPK4Q8NE63 616 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 SPATA18Q8TC71 538 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 SNRNP27Q8WVK2 155 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 BORCS5Q969J3 196 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 HSPBAP1Q96EW2 488 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF778Q96MU6 729 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 IMPG2Q9BZV3 1241 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 KCNH7Q9NS40 1196 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PNPLA3Q9NST1 481 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 PTBP2Q9UKA9 531 aaKnown RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 MYRFQ9Y2G1 1151 aa16.36■□□□□ 0.21
SCLT1-208ENST00000506368 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.36■□□□□ 0.21
SCLT1-208ENST00000506368 GSTM4Q03013 218 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 KLF10Q13118 480 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 DARS2Q6PI48 645 aaKnown RBP16.35■□□□□ 0.21
SCLT1-208ENST00000506368 KYQ8NBH2 561 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 RP9Q8TA86 221 aaKnown RBP16.35■□□□□ 0.21
SCLT1-208ENST00000506368 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 KBTBD7Q8WVZ9 684 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 SREK1Q8WXA9 508 aaKnown RBP16.35■□□□□ 0.21
SCLT1-208ENST00000506368 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 OXCT2Q9BYC2 517 aaPredicted RBP16.35■□□□□ 0.21
SCLT1-208ENST00000506368 PDZD7Q9H5P4 517 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 ARHGEF38Q9NXL2 777 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 EPS15L1Q9UBC2 864 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 HACL1Q9UJ83 578 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 CDH7Q9ULB5 785 aa16.35■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF195O14628 629 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 H2AFYO75367 372 aaKnown RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 LRCH4O75427 683 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 EPHX2P34913 555 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 HERC3Q15034 1050 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 XKR9Q5GH70 373 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 APOBEC3HQ6NTF7 200 aaKnown RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 KCTD6Q8NC69 237 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 SHKBP1Q8TBC3 707 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 CCDC68Q9H2F9 335 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 AGO4Q9HCK5 861 aaKnown RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 FADS3Q9Y5Q0 445 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 STYXL1Q9Y6J8 313 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 RGSL1A5PLK6 1076 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 CXorf49A8MYA2 514 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 WNT10BO00744 389 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 PLIN3O60664 434 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF189O75820 626 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 TOMM70O94826 608 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 GSRP00390 522 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 MX2P20592 715 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 CACNB3P54284 484 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ABCE1P61221 599 aaKnown RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 BTG3Q14201 252 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF829Q3KNS6 432 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-208ENST00000506368 PIGGQ5H8A4 983 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 PGAM4Q8N0Y7 254 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF597Q96LX8 424 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 GPRC5CQ9NQ84 441 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 MRGBPQ9NV56 204 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 SLC8A2Q9UPR5 921 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ZNF711Q9Y462 761 aa16.34■□□□□ 0.21
SCLT1-208ENST00000506368 ARID2Q68CP9 1835 aa16.33■□□□□ 0.21
SCLT1-208ENST00000506368 CLRN2A0PK11 232 aa16.33■□□□□ 0.21
SCLT1-208ENST00000506368 TMEM114B3SHH9 223 aa16.33■□□□□ 0.21
SCLT1-208ENST00000506368 H3BNH8 94 aa16.33■□□□□ 0.21
SCLT1-208ENST00000506368 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.21
SCLT1-208ENST00000506368 BCAS2O75934 225 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms