RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 SCAND2PQ9GZW5 306 aaPredicted RBP22■■□□□ 1.11
SQSTM1-210ENST00000506042 METTL12A8MUP2 240 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 IGLV3-19P01714 112 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 PPP3CAQ08209 521 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 GEN1Q17RS7 908 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 SGO2Q562F6 1265 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 TCERG1LQ5VWI1 586 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 GLRX5Q86SX6 157 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 OR2T3Q8NH03 318 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 DDX50Q9BQ39 737 aaKnown RBP21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 MKRN2Q9H000 416 aaKnown RBP21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 SLC6A17Q9H1V8 727 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 LHX5Q9H2C1 402 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 GAREM1Q9H706 876 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 APOBEC3GQ9HC16 384 aaKnown RBP21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 TM7SF3Q9NS93 570 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 ABCC13Q9NSE7 274 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 KIAA1257Q9ULG3 409 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 PCDHGB2Q9Y5G2 931 aa21.99■■□□□ 1.11
SQSTM1-210ENST00000506042 PCNX2A6NKB5 2137 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 CEP295Q9C0D2 2601 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 XPO1O14980 1071 aaKnown RBP21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 GJB3O75712 270 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 KLKB1P03952 638 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 DNTTP04053 509 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 TBXAS1P24557 533 aaPredicted RBP21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 MAOBP27338 520 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 BST2Q10589 180 aaKnown RBP21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 C1orf220Q5T0J3 134 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 AHI1Q8N157 1196 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 OR2I1PQ8NGU4 316 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 PIWIL1Q96J94 861 aaKnown RBP21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 CCDC86Q9H6F5 360 aaKnown RBP21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 MAPK8IP1Q9UQF2 711 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 HPSEQ9Y251 543 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 NCKAP1Q9Y2A7 1128 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 FAM208BQ5VWN6 2430 aa21.98■■□□□ 1.11
SQSTM1-210ENST00000506042 DFNA5O60443 496 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 RNASEH1O60930 286 aaKnown RBP21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 SETSIPP0DME0 302 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 SLC11A2P49281 568 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 ST8SIA6P61647 398 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 RAB41Q5JT25 222 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 ADAT2Q7Z6V5 191 aaKnown RBP21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 PROSER1Q86XN7 944 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 UNC45BQ8IWX7 931 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 GALNT15Q8N3T1 639 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 TMA16Q96EY4 203 aaKnown RBP21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 KIAA1522Q9P206 1035 aaPredicted RBP21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 SUN2Q9UH99 717 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 HOOK1Q9UJC3 728 aaKnown RBP21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 SCML1Q9UN30 329 aa21.97■■□□□ 1.11
SQSTM1-210ENST00000506042 CD19P15391 556 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 RAD23BP54727 409 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 CETN1Q12798 172 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 DPYDQ12882 1025 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 TRIP4Q15650 581 aaPredicted RBP21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 ADGRF1Q5T601 910 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 PM20D1Q6GTS8 502 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 LRSAM1Q6UWE0 723 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 FMNL3Q8IVF7 1028 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 FAM217AQ8IXS0 508 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 SLC4A11Q8NBS3 891 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 ARID3AQ99856 593 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 BTBD1Q9H0C5 482 aa21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 EIF2B4Q9UI10 523 aaKnown RBP21.96■■□□□ 1.11
SQSTM1-210ENST00000506042 GON4LQ3T8J9 2241 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 IRAK2O43187 625 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 POLR2EP19388 210 aaKnown RBP21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 CAMK2GQ13555 558 aaPredicted RBP21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 GOLGA7BQ2TAP0 167 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 DCAF17Q5H9S7 520 aaPredicted RBP21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 NUGGCQ68CJ6 796 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 KRBA2Q6ZNG9 492 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 RHBDD1Q8TEB9 315 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 ULBP1Q9BZM6 244 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 OSGEPQ9NPF4 335 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 CNGB3Q9NQW8 809 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 TSPAN16Q9UKR8 245 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 PCOLCE2Q9UKZ9 415 aa21.95■■□□□ 1.1
SQSTM1-210ENST00000506042 A0A1W2PQ27 194 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 A0A1W2PQ64 194 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 SLC16A3O15427 465 aaKnown RBP21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 VDRP11473 427 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 STILQ15468 1287 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 HLA-BQ31612 363 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 MPP7Q5T2T1 576 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 CHST9Q7L1S5 443 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 FAM124AQ86V42 546 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 CAMK1GQ96NX5 476 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 TRIM62Q9BVG3 475 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 SGK2Q9HBY8 427 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 GGA2Q9UJY4 613 aa21.94■■□□□ 1.1
SQSTM1-210ENST00000506042 GOLGA6L4A6NEF3 574 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 PRKCHP24723 683 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 GRK6P43250 576 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 GRIA4P48058 902 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 NDUFA8P51970 172 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 FAM193AP78312 1265 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 FKBP3Q00688 224 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms