RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 RNF139Q8WU17 664 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 EDEM1Q92611 657 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 PRCCQ92733 491 aaPredicted RBP11.89□□□□□ -0.51
SIL1-208ENST00000505945 PLD4Q96BZ4 506 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 SIPA1Q96FS4 1042 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 SLC2A11Q9BYW1 496 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 MIR1-1HGQ9H1L0 117 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 SFMBT1Q9UHJ3 866 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 TSPAN16Q9UKR8 245 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 MSRB2Q9Y3D2 182 aa11.89□□□□□ -0.51
SIL1-208ENST00000505945 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 TMEM8BA6NDV4 472 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 SRRM3A6NNA2 597 aaPredicted RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 YJEFN3A6XGL0 299 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 METTL12A8MUP2 240 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 E7ENQ6 273 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 XPO1O14980 1071 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 TIMM44O43615 452 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 EPHX1P07099 455 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 HLA-EP13747 358 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 CD19P15391 556 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 OXTRP30559 389 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 RDXP35241 583 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 HARS2P49590 506 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 BCAT1P54687 386 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 ARID5AQ03989 594 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 ADIGQ0VDE8 80 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 LRMPQ12912 555 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 GRIK2Q13002 908 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 SLC14A1Q13336 389 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 TRIP6Q15654 476 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 MPPE1Q53F39 396 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 SGO2Q562F6 1265 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 DCAF12L1Q5VU92 463 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 ANKRD40Q6AI12 368 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 SERPINA13PQ6UXR4 307 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 FAM124AQ86V42 546 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 ZCCHC9Q8N567 271 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 ZCCHC14Q8WYQ9 949 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
SIL1-208ENST00000505945 NUP58Q9BVL2 599 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 HESX1Q9UBX0 185 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 COQ4Q9Y3A0 265 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 ATP6V1DQ9Y5K8 247 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 SPEGQ15772 3267 aa11.88□□□□□ -0.51
SIL1-208ENST00000505945 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ANKRD11Q6UB99 2663 aaPredicted RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 DSPP15924 2871 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 H0Y626 953 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 MSI1O43347 362 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 TRIM16O95361 564 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ACADMP11310 421 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 HLA-FP30511 346 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 PMS1P54277 932 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 BST2Q10589 180 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 HNRNPDQ14103 355 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 E2F5Q15329 346 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ZNF423Q2M1K9 1284 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ADGRF1Q5T601 910 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 NAXDQ8IW45 347 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 FMR1NBQ8N0W7 255 aaPredicted RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 SIX6OS1Q8N1H7 587 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ZNF366Q8N895 744 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 PNPLA1Q8N8W4 532 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 CYB5D2Q8WUJ1 264 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 TMA16Q96EY4 203 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 CCDC34Q96HJ3 373 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 TSG101Q99816 390 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 ZDHHC5Q9C0B5 715 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 IL21RQ9HBE5 538 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 OLA1Q9NTK5 396 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 EIF2B4Q9UI10 523 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 HBS1LQ9Y450 684 aaKnown RBP11.87□□□□□ -0.51
SIL1-208ENST00000505945 NFE2L3Q9Y4A8 694 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 PCDHB9Q9Y5E1 797 aa11.87□□□□□ -0.51
SIL1-208ENST00000505945 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 ATRXP46100 2492 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 WDFY3Q8IZQ1 3526 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 CKAP5Q14008 2032 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 TRIM49BA6NDI0 452 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 O00370 1275 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 PIK3R2O00459 728 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 BCAT2O15382 392 aaPredicted RBP11.86□□□□□ -0.51
SIL1-208ENST00000505945 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
SIL1-208ENST00000505945 GABBR2O75899 941 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 IGLV3-19P01714 112 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 VDRP11473 427 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 LCP1P13796 627 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 CAMK2GQ13555 558 aaPredicted RBP11.86□□□□□ -0.51
SIL1-208ENST00000505945 FNDC3BQ53EP0 1204 aaKnown RBP11.86□□□□□ -0.51
SIL1-208ENST00000505945 ZNF658Q5TYW1 1059 aaPredicted RBP11.86□□□□□ -0.51
SIL1-208ENST00000505945 CHST9Q7L1S5 443 aa11.86□□□□□ -0.51
SIL1-208ENST00000505945 RAB44Q7Z6P3 723 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms