RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF180Q9UJW8 692 aa17.85■□□□□ 0.45
TRAPPC11-204ENST00000505676 DCLK1O15075 740 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 FAM155BO75949 473 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 ZWINTO95229 277 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CXCR3P49682 368 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 YWHAHQ04917 246 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 NME3Q13232 169 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 NOMO2Q5JPE7 1267 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 LGSNQ5TDP6 509 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 C6orf89Q6UWU4 347 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 PIGWQ7Z7B1 504 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 DCP1BQ8IZD4 617 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CABS1Q96KC9 395 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 RABEP2Q9H5N1 569 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 INPP5FQ9Y2H2 1132 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 APRTP07741 180 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 USP17L7P0C7H9 530 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 SSTR1P30872 391 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 TPI1P60174 286 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 SPARCL1Q14515 664 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 BRMS1LQ5PSV4 323 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 TRAF7Q6Q0C0 670 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 RGS9BPQ6ZS82 235 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 SPATA2LQ8IUW3 424 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CCDC110Q8TBZ0 833 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CD99L2Q8TCZ2 262 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 FUBP3Q96I24 572 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 PAAF1Q9BRP4 392 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 WDR83Q9BRX9 315 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 NAT9Q9BTE0 207 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 COLEC11Q9BWP8 271 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 STARD7Q9NQZ5 370 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CREBZFQ9NS37 354 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 DDIT4Q9NX09 232 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
TRAPPC11-204ENST00000505676 SYN3O14994 580 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 AOC2O75106 756 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 VIMP08670 466 aaKnown RBP17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 BRCC3P46736 316 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 NFE2Q16621 373 aaPredicted RBP17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 PARP6Q2NL67 630 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 HFE2Q6ZVN8 426 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 BHLHA9Q7RTU4 235 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 TAX1BP1Q86VP1 789 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 OTUD6BQ8N6M0 293 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 SLC44A1Q8WWI5 657 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 KCNK16Q96T55 309 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 VAT1Q99536 393 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 OSBPL2Q9H1P3 480 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 WDCPQ9H6R7 721 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 ABCC13Q9NSE7 274 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 PHF24Q9UPV7 400 aa17.83■□□□□ 0.45
TRAPPC11-204ENST00000505676 MFSD11O43934 449 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 OAZ2O95190 189 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 MAP2K2P36507 400 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 GAD2Q05329 585 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 BFSP2Q13515 415 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 ANKRD20A2Q5SQ80 823 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 ANKRD20A1Q5TYW2 823 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 ANKRD20A3Q5VUR7 823 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 GPRIN1Q7Z2K8 1008 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 NDRG1Q92597 394 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 TMEM161AQ9NX61 479 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 IGSF9Q9P2J2 1179 aa17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 ZC3H7BQ9UGR2 993 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-204ENST00000505676 FRMPD3Q5JV73 1810 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 A0A1W2PQ45 241 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 A0A1W2PQY0 241 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 KBTBD13C9JR72 458 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 MYO1CO00159 1063 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 ARVCFO00192 962 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 TM9SF1O15321 606 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 CPP00450 1065 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 INHBAP08476 426 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 BDNFP23560 247 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 PRKCHP24723 683 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 YWHAGP61981 247 aaKnown RBP eCLIP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 HP1BP3Q5SSJ5 553 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 BSPRYQ5W0U4 402 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 PYROXD2Q8N2H3 581 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 ANKRD42Q8N9B4 389 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 TCRBV9S1A1TA0A576 114 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 ERI2A8K979 691 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 CREB3O43889 395 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 IGFBP6P24592 240 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 COG7P83436 770 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 PKN2Q16513 984 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 ZNF449Q6P9G9 518 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 CCDC121Q6ZUS5 278 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 CAND1Q86VP6 1230 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 LRRC34Q8IZ02 419 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 ARHGAP18Q8N392 663 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 DENND1AQ8TEH3 1009 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 DCAKDQ8WVC6 231 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 OXCT2Q9BYC2 517 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 OSBPL7Q9BZF2 842 aa17.82■□□□□ 0.44
TRAPPC11-204ENST00000505676 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms