RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC13-208	ENST00000505553	SYNDIG1L	A6NDD5	238 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PABPN1L	A6NDY0	278 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553		H3BNC9	293 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	AGPS	O00116	658 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TNPO2	O14787	897 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PRAMEF10	O60809	474 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RAD17	O75943	681 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RPN1	P04843	607 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CLEC3B	P05452	202 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	AKR1B1	P15121	316 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MCC	P23508	829 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PRKCH	P24723	683 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	GALNS	P34059	522 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	HTR7	P34969	479 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MLH1	P40692	756 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PNPLA4	P41247	253 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	NHLH2	Q02577	135 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RNASEL	Q05823	741 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	FPGS	Q05932	587 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	GOLGA8F	Q08AF8	430 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SEMA3B	Q13214	749 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TUBB3	Q13509	450 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CBFB	Q13951	182 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	WTAP	Q15007	396 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PSMD6	Q15008	389 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ST3GAL2	Q16842	350 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RBM20	Q5T481	1227 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CCDC144NL	Q6NUI1	221 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SYNE3	Q6ZMZ3	975 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PIK3AP1	Q6ZUJ8	805 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MICALCL	Q6ZW33	695 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	H1FNT	Q75WM6	255 aa	Predicted RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	KRT74	Q7RTS7	529 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RAB11FIP4	Q86YS3	637 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SYT12	Q8IV01	421 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	GSPT2	Q8IYD1	628 aa	Known RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	IZUMO1	Q8IYV9	350 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	FUK	Q8N0W3	1084 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ANKRD35	Q8N283	1001 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MB21D1	Q8N884	522 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	LINS1	Q8NG48	757 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	OR56A1	Q8NGH5	318 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ETNPPL	Q8TBG4	499 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CREB3L4	Q8TEY5	395 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SNX19	Q92543	992 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ATP2A3	Q93084	1043 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SH3KBP1	Q96B97	665 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	C17orf80	Q9BSJ5	609 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PLA2G12B	Q9BX93	195 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SYNPO2L	Q9H987	977 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RMI1	Q9H9A7	625 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PLSCR4	Q9NRQ2	329 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	VSX1	Q9NZR4	365 aa	Predicted RBP	4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	SERTAD3	Q9UJW9	196 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RIMKLB	Q9ULI2	386 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ENTPD2	Q9Y5L3	495 aa		4.27	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3D	A0A087WVF3	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3I	A0A087WXS9	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3E	A0A087X179	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3K	A0A087X1G2	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	LOC105369274	A0A096LPK9	316 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	LOC102723532	A0A0G2JNH3	316 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MYADML2	A6NDP7	307 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3B	A6NDS4	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3L	B9A6J9	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PSMD9	O00233	223 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CCNDBP1	O95273	360 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ADH4	P08319	380 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CYP21A2	P08686	494 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	WEE2	P0C1S8	567 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3H	P0C7X1	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TMEM225B	P0DP42	221 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	UBL4A	P11441	157 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	VDR	P11473	427 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	LAMP2	P13473	410 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PTMS	P20962	102 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ACO1	P21399	889 aa	Known RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	DRD1	P21728	446 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	FGFR4	P22455	802 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	MMP8	P22894	467 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ADORA2A	P29274	412 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	THBS4	P35443	961 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PBX1	P40424	430 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	RARS	P54136	660 aa	Known RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TERF1	P54274	439 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	EIF4A1	P60842	406 aa	Known RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	HSD11B2	P80365	405 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	CALD1	Q05682	793 aa	Known RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBCE	Q15813	527 aa	Predicted RBP	4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	AAK1	Q2M2I8	961 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	PRICKLE4	Q2TBC4	344 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	DEPDC1	Q5TB30	811 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ARMC3	Q5W041	872 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	METRNL	Q641Q3	311 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	ANKRD40	Q6AI12	368 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3G	Q6DHY5	549 aa		4.26	□□□□□ -1.73
TRAPPC13-208	ENST00000505553	TBC1D3C	Q6IPX1	549 aa		4.26	□□□□□ -1.73

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