RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PDIK1LQ8N165 341 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KCTD6Q8NC69 237 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 OR8H1Q8NGG4 311 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CHURC1Q8WUH1 139 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TTC9Q92623 222 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PBKQ96KB5 322 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM84BQ96KN1 310 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MFSD14AQ96MC6 490 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TTC25Q96NG3 672 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC37BQ96QE4 947 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC106Q9BWC9 280 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TEKT3Q9BXF9 490 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 AMNQ9BXJ7 453 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TLE6Q9H808 572 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RNPEPL1Q9HAU8 725 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PCDH12Q9NPG4 1184 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 FARSBQ9NSD9 589 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KBTBD4Q9NVX7 518 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PTTG2Q9NZH5 202 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 AUP1Q9Y679 476 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PAPPA2Q9BXP8 1791 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCT8L1PA6NM43 557 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ORC4O43929 436 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DDNO94850 711 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TDP2O95551 362 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SERPINF2P08697 491 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM153BP0C7A2 387 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POLR2BP30876 1174 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 IDUAP35475 653 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 HADHBP55084 474 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MARSP56192 900 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ESRRGP62508 458 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TUBA4AP68366 448 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNA1P78396 465 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POU6F2P78424 691 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM153CQ494X1 144 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 EPC2Q52LR7 807 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CLVS2Q5SYC1 327 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 C6orf118Q5T5N4 469 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MAP3K21Q5TCX8 1036 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PXDC1Q5TGL8 231 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KLC3Q6P597 504 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POTEGQ6S5H5 508 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KIAA1324Q6UXG2 1013 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGAP36Q6ZRI8 547 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PRR23CQ6ZRP0 262 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 EPM2AIP1Q7L775 607 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 OTOP3Q7RTS5 596 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SAMD7Q7Z3H4 446 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PLEKHH3Q7Z736 793 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NOP9Q86U38 636 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC117Q8IWD4 279 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM59Q8IWR1 403 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 EID3Q8N140 333 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TP53I13Q8NBR0 393 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 OR4M2Q8NGB6 313 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC30A5Q8TAD4 765 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF507Q8TCN5 953 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CHPT1Q8WUD6 406 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PRPF31Q8WWY3 499 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CD101Q93033 1021 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POM121Q96HA1 1249 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TGS1Q96RS0 853 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 EPB41L4BQ9H329 900 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 Q9H521 79 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ECT2Q9H8V3 914 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RC3H2Q9HBD1 1191 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SYTL2Q9HCH5 934 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SH3GLB2Q9NR46 395 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TXLNGQ9NUQ3 528 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SELENONQ9NZV5 590 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM153AQ9UHL3 310 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SMG5Q9UPR3 1016 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CORINQ9Y5Q5 1042 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ATAD5Q96QE3 1844 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF103-CHMP3A0A140T963 221 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 MTMR11A4FU01 709 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ZSCAN5CA6NGD5 496 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 LINC00587B1AMM8 73 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 BET1O15155 118 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 POLR1CO15160 346 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 GAS2O43903 313 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 EPN2O95208 641 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 EPOP01588 193 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TNNC2P02585 160 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 FTLP02792 175 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 S100A6P06703 90 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PLEKP08567 350 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT10P13645 584 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 HOXB8P17481 243 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 TCN1P20061 433 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNA2P20248 432 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 EEF1DP29692 281 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 LIMK1P53667 647 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ARPP19P56211 112 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 IFITM3Q01628 133 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJC3Q13217 504 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 PRPSAP1Q14558 356 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 ABCB5Q2M3G0 1257 aa3.78□□□□□ -1.8
PCDH11X-208ENST00000504220 C2CD6Q53TS8 623 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms