RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 WASHC2DQ5SRD0 308 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CLEC9AQ6UXN8 241 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 USP49Q70CQ1 688 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 RTL10Q7L3V2 364 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 SRGAP1Q7Z6B7 1085 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 P3H2Q8IVL5 708 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 UEVLDQ8IX04 471 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 FSTL5Q8N475 847 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMEM199Q8N511 208 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZBTB34Q8NCN2 500 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 WIPF2Q8TF74 440 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 SNRNP27Q8WVK2 155 aaKnown RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 NMD3Q96D46 503 aaKnown RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TAAR9Q96RI9 348 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 B3GNT5Q9BYG0 378 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 RHOBTB2Q9BYZ6 727 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TM6SF1Q9BZW5 370 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 UBA5Q9GZZ9 404 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ATP6V0A4Q9HBG4 840 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PAPOLBQ9NRJ5 636 aaKnown RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PLK2Q9NYY3 685 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 MSRB1Q9NZV6 116 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 CPNE7Q9UBL6 633 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 KCNG2Q9UJ96 466 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF180Q9UJW8 692 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 PCDHA12Q9UN75 941 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 COG5Q9UP83 839 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 SLC27A6Q9Y2P4 619 aa2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 TP53BP1Q12888 1972 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 ZNF335Q9H4Z2 1342 aaPredicted RBP2.41□□□□□ -2.02
HMGB3P17-201ENST00000504195 COL2A1P02458 1487 aaPredicted RBP2.4□□□□□ -2.02
HMGB3P17-201ENST00000504195 TMEM272A0A1B0GTI8 110 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC22A23A1A5C7 686 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 CFAP69A5D8W1 941 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 FAM227AF5H4B4 570 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 PRPF4O43172 522 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 CA12O43570 354 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 HOXC6P09630 235 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 TMEM225BP0DP42 221 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZKSCAN1P17029 563 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 TFEBP19484 476 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 IBSPP21815 317 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 NTSR1P30989 418 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 HOXA7P31268 230 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 GALNSP34059 522 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 ART1P52961 327 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 MCL1Q07820 350 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 OS9Q13438 667 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 PIN1Q13526 163 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 CNGA3Q16281 694 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC4A8Q2Y0W8 1093 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 CEP85LQ5SZL2 805 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 TAF3Q5VWG9 929 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 RBM44Q6ZP01 1051 aaKnown RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 MORC1Q86VD1 984 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 TMTC2Q8N394 836 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 LMO3Q8TAP4 145 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 STAG1Q8WVM7 1258 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 IPCEF1Q8WWN9 437 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 PHF21BQ96EK2 531 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZDHHC12Q96GR4 267 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 CHMP4BQ9H444 224 aaKnown RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 AGO4Q9HCK5 861 aaKnown RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 STK32BQ9NY57 414 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 SEMA5BQ9P283 1151 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 DKK4Q9UBT3 224 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 ANAPC4Q9UJX5 808 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 TPCN1Q9ULQ1 816 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 HEMK1Q9Y5R4 338 aaPredicted RBP2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 USP19O94966 1318 aa2.4□□□□□ -2.03
HMGB3P17-201ENST00000504195 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 A0A1B0GUV1 79 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 TTC34A8MYJ7 566 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 PODXLO00592 558 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 ANP32CO43423 234 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 FRS3O43559 492 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 UGDHO60701 494 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 CTNND1O60716 968 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 ALDH1L1O75891 902 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC3A2P08195 630 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 MYBP10242 640 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 TXNP10599 105 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 ST6GAL1P15907 406 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 KRT2P35908 639 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 COMPP49747 757 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 VPS41P49754 854 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 VEGFCP49767 419 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 DGKQP52824 942 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 COPAP53621 1224 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 SLC20A2Q08357 652 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 DNASE1L3Q13609 305 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 MYBPC2Q14324 1141 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 CNGA2Q16280 664 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 PTPROQ16827 1216 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 IZUMO4Q1ZYL8 232 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 C3orf38Q5JPI3 329 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 GORABQ5T7V8 394 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 FAM43BQ6ZT52 329 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms