RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 PLEKHB1Q9UF11 243 aaPredicted RBP13.2□□□□□ -0.3
LSM6-204ENST00000504181 SIX4Q9UIU6 781 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
LSM6-204ENST00000504181 A0A1B0GVM2 712 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 PMS2P1A4D2B8 440 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 TLR4O00206 839 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 ITGB2P05107 769 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 ZDHHC11BP0C7U3 371 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 WARSP23381 471 aaKnown RBP13.19□□□□□ -0.3
LSM6-204ENST00000504181 SLC5A3P53794 718 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 RBP5P82980 135 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 E2F5Q15329 346 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
LSM6-204ENST00000504181 ARSHQ5FYA8 562 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 SLFN12LQ6IEE8 588 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 DPH6Q7L8W6 267 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 SKAP1Q86WV1 359 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 GANCQ8TET4 914 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 KCNK16Q96T55 309 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 MTMR12Q9C0I1 747 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
LSM6-204ENST00000504181 MED13Q9UHV7 2174 aa13.19□□□□□ -0.3
LSM6-204ENST00000504181 SPENQ96T58 3664 aaKnown RBP13.19□□□□□ -0.3
LSM6-204ENST00000504181 POLQO75417 2590 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 CDRT15L2A8MXV6 281 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 FAM13AO94988 1023 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 GJB6O95452 261 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 PENKP01210 267 aaPredicted RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 PLA2G4BP0C869 781 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 POU3F2P20265 443 aaPredicted RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 GALCP54803 685 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 INHBCP55103 352 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 POU5F1Q01860 360 aaKnown RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 ZNF211Q13398 564 aaPredicted RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 ISXQ2M1V0 245 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 Q6ZNB5 142 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 LIMS2Q7Z4I7 341 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 SPATS2Q86XZ4 545 aaKnown RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 CCDC83Q8IWF9 413 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 ATXN7L3BQ96GX2 97 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 PRR11Q96HE9 360 aaPredicted RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 SERAC1Q96JX3 654 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 MRPL45Q9BRJ2 306 aaKnown RBP13.18□□□□□ -0.3
LSM6-204ENST00000504181 FAM213AQ9BRX8 229 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 B3GNT5Q9BYG0 378 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 SLC25A18Q9H1K4 315 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 ERVMER34-1Q9H9K5 563 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 CLEC4EQ9ULY5 219 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 NCKAP1Q9Y2A7 1128 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 STYXL1Q9Y6J8 313 aa13.18□□□□□ -0.3
LSM6-204ENST00000504181 MDM4O15151 490 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
LSM6-204ENST00000504181 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 PTPN1P18031 435 aaKnown RBP13.17□□□□□ -0.3
LSM6-204ENST00000504181 SCP2P22307 547 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 GTF2BQ00403 316 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 ZBTB16Q05516 673 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 KCNJ12Q14500 433 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 SLC45A4Q5BKX6 768 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 CYB5D2Q8WUJ1 264 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 HPDLQ96IR7 371 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 SNX25Q9H3E2 840 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 TJP2Q9UDY2 1190 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 SERGEFQ9UGK8 458 aa13.17□□□□□ -0.3
LSM6-204ENST00000504181 R3HCC1Q9Y3T6 440 aaKnown RBP13.17□□□□□ -0.3
LSM6-204ENST00000504181 FFAR2O15552 330 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 C7P10643 843 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
LSM6-204ENST00000504181 GNL1P36915 607 aaPredicted RBP13.16□□□□□ -0.3
LSM6-204ENST00000504181 DUSP3P51452 185 aaPredicted RBP13.16□□□□□ -0.3
LSM6-204ENST00000504181 IL17AQ16552 155 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 TBR1Q16650 682 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 ZNF776Q68DI1 518 aaPredicted RBP13.16□□□□□ -0.3
LSM6-204ENST00000504181 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 OR4C6Q8NH72 309 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 HPS3Q969F9 1004 aa13.16□□□□□ -0.3
LSM6-204ENST00000504181 TMEM245Q9H330 911 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms