RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PARVAQ9NVD7 372 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 SMPD4Q9NXE4 827 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.46□□□□□ -0.73
NUP54-203ENST00000504173 MYO1AQ9UBC5 1043 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 STAP1Q9ULZ2 295 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 ARHGAP26Q9UNA1 814 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 CPQQ9Y646 472 aa10.46□□□□□ -0.73
NUP54-203ENST00000504173 EPN1Q9Y6I3 576 aaPredicted RBP10.46□□□□□ -0.73
NUP54-203ENST00000504173 NUP210Q8TEM1 1887 aaPredicted RBP10.45□□□□□ -0.74
NUP54-203ENST00000504173 TCRBV5S1A1TA0A578 114 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SLC12A8A0AV02 714 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 HEPACAM2A8MVW5 462 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 TM4SF5O14894 197 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 ZNF263O14978 683 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 LAMTOR5O43504 91 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 NDUFA10O95299 355 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 HMBSP08397 361 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 IRF1P10914 325 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 FCARP24071 287 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 NOS2P35228 1153 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 VIPR2P41587 438 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 MATKP42679 507 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SULT1E1P49888 294 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 LIMK1P53667 647 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 MAMLD1Q13495 774 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 HTR4Q13639 388 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 MTF1Q14872 753 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 C10orf76Q5T2E6 689 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SYPL2Q5VXT5 272 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 TANGO2Q6ICL3 276 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 PLEKHA7Q6IQ23 1121 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 DCUN1D2Q6PH85 259 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 PARM1Q6UWI2 310 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 RAD9BQ6WBX8 426 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 ARCQ7LC44 396 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 TAC4Q86UU9 113 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 DDX42Q86XP3 938 aaKnown RBP eCLIP10.45□□□□□ -0.74
NUP54-203ENST00000504173 LRRC8AQ8IWT6 810 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 CELF5Q8N6W0 485 aaKnown RBP10.45□□□□□ -0.74
NUP54-203ENST00000504173 EMC1Q8N766 993 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SH3RF2Q8TEC5 729 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 CTNNBL1Q8WYA6 563 aaPredicted RBP10.45□□□□□ -0.74
NUP54-203ENST00000504173 FGF14Q92915 247 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 E2F7Q96AV8 911 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 ELSPBP1Q96BH3 223 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 PDLIM2Q96JY6 352 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 MCEEQ96PE7 176 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 KXD1Q9BQD3 176 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 PACSIN1Q9BY11 444 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 FAM204AQ9H8W3 233 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 TRPV4Q9HBA0 871 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 MRPL47Q9HD33 250 aaKnown RBP10.45□□□□□ -0.74
NUP54-203ENST00000504173 ARHGEF3Q9NR81 526 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 OBP2AQ9NY56 170 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SFMBT1Q9UHJ3 866 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 TMEM59LQ9UK28 342 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 CA14Q9ULX7 337 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 CCL26Q9Y258 94 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SCINQ9Y6U3 715 aa10.45□□□□□ -0.74
NUP54-203ENST00000504173 SIGLEC16A6NMB1 481 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 CYSRT1A8MQ03 144 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 EIF3CLB5ME19 914 aaKnown RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 ANHXE9PGG2 379 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 LEFTY2O00292 366 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 MSI1O43347 362 aaKnown RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 ECI2O75521 394 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 LCA5LO95447 670 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 TRUB2O95900 331 aaKnown RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 RETP07949 1114 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 TMEM253P0C7T8 217 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 PDGFRAP16234 1089 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 GPD1P21695 349 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 SDC4P31431 198 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 GBP1P32455 592 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 RFC1P35251 1148 aaPredicted RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 FLT3P36888 993 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 MAGEA1P43355 309 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 KPNA1P52294 538 aaPredicted RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 STARD6P59095 220 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 GPC5P78333 572 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 PITX1P78337 314 aaPredicted RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 COG7P83436 770 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 CCDC173Q0VFZ6 552 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 USP4Q13107 963 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 ZNF77Q15935 545 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 CSRP2Q16527 193 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 PRR23CQ6ZRP0 262 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 YAF2Q8IY57 180 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 JOSD2Q8TAC2 188 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 BPIFB1Q8TDL5 484 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 RXFP2Q8WXD0 754 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 NXPE3Q969Y0 559 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 ARHGEF26Q96DR7 871 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 RSPRY1Q96DX4 576 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 ZFRQ96KR1 1074 aaKnown RBP10.44□□□□□ -0.74
NUP54-203ENST00000504173 SERPINB11Q96P15 392 aa10.44□□□□□ -0.74
NUP54-203ENST00000504173 EIF3CQ99613 913 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms