RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 GYPCP04921 128 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 CCR3P51677 355 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 RNASE9P60153 205 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 KLHL30Q0D2K2 578 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 MPPE1Q53F39 396 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 FAM133BQ5BKY9 247 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 ZC3H12AQ5D1E8 599 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 OTUD1Q5VV17 481 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 GRAMD4Q6IC98 578 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 PPP1R2P3Q6NXS1 205 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 MON1BQ7L1V2 547 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 ZNF571Q7Z3V5 609 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 PGAP3Q96FM1 320 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 TMEM51Q9NW97 253 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 STAP1Q9ULZ2 295 aa18.94■□□□□ 0.62
PDLIM7-209ENST00000503346 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.94■□□□□ 0.626e-7■□□□□ 9.2
PDLIM7-209ENST00000503346 KCNU1A8MYU2 1149 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 H0Y858 1186 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 ATG13O75143 517 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 PAPSS2O95340 614 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 CALB1P05937 261 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 CISD3P0C7P0 127 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC2A3P11169 496 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 CHRM1P11229 460 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 CCR1P32246 355 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 FLT3P36888 993 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 TNFRSF4P43489 277 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 KDSRQ06136 332 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 PPP2R5DQ14738 602 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC25A52Q3SY17 297 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 SPECC1LQ69YQ0 1117 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 NADSYN1Q6IA69 706 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 ACAD10Q6JQN1 1059 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 PKN3Q6P5Z2 889 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 SARM1Q6SZW1 724 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 TERB1Q8NA31 727 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 DDI1Q8WTU0 396 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 BHMTQ93088 406 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 BTN2A3PQ96KV6 586 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 DDX50Q9BQ39 737 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 PLK2Q9NYY3 685 aa18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 LUC7L2Q9Y383 392 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-209ENST00000503346 WDFY4Q6ZS81 3184 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 GOLGA6L7A0A1B0GV03 622 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 M0QYT0 321 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 TRIM24O15164 1050 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 HOXD9P28356 352 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC6A4P31645 630 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 CXCL12P48061 93 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 DGKGP49619 791 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 MTA1Q13330 715 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 ZNF528Q3MIS6 628 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 MPP7Q5T2T1 576 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 PIK3R6Q5UE93 754 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 HGSNATQ68CP4 663 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 RNF43Q68DV7 783 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 TRNP1Q6NT89 227 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 NUDT18Q6ZVK8 323 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 SFTPA1Q8IWL2 248 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 ATP6V0D2Q8N8Y2 350 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 C3orf20Q8ND61 904 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 TMA16Q96EY4 203 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 ADAM33Q9BZ11 813 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 METTL5Q9NRN9 209 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 CALCOCO1Q9P1Z2 691 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC12A6Q9UHW9 1150 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 XPO7Q9UIA9 1087 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC27A6Q9Y2P4 619 aa18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 BZW2Q9Y6E2 419 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-209ENST00000503346 SYNJ2BP-COX16A0A087WUM0 186 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TBC1D3BA6NDS4 549 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 DDX3XO00571 662 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TSPAN3O60637 253 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 MOCS2O96007 188 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 F9P00740 461 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 SP9P0CG40 484 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 SKILP12757 684 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TDGF1P13385 188 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TFE3P19532 575 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 SULT1E1P49888 294 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 MRPS21P82921 87 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 SATB1Q01826 763 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 NME3Q13232 169 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TRIM14Q14142 442 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 RFWD3Q6PCD5 774 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 BNIPLQ7Z465 357 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 PHLDB2Q86SQ0 1253 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 VSTM4Q8IW00 320 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 MCOLN2Q8IZK6 566 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 RPLP0P6Q8NHW5 317 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 KCNV2Q8TDN2 545 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 VCPIP1Q96JH7 1222 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TBCBQ99426 244 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 SLC2A11Q9BYW1 496 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 C2orf42Q9NWW7 574 aa18.91■□□□□ 0.62
PDLIM7-209ENST00000503346 TAS2R14Q9NYV8 317 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms