RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 WIPF3A6NGB9 483 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 AQP12BA6NM10 295 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 CLIC1O00299 241 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 PEX14O75381 377 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 NPPBP16860 134 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 ATF7P17544 494 aaPredicted RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 MMP8P22894 467 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 HSPA2P54652 639 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 CHAF1AQ13111 956 aaPredicted RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 SPARCL1Q14515 664 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 MFSD13AQ14CX5 517 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 LARS2Q15031 903 aaKnown RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 PUM3Q15397 648 aaKnown RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 TRIM71Q2Q1W2 868 aaKnown RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 P3H1Q32P28 736 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 CCDC144NLQ6NUI1 221 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 VSTM1Q6UX27 236 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 PIK3AP1Q6ZUJ8 805 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 POF1BQ8WVV4 589 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 KAZALD1Q96I82 304 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 OBP2BQ9NPH6 170 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 FSCN3Q9NQT6 498 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 COMMD10Q9Y6G5 202 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 SPAG9O60271 1321 aaKnown RBP6.66□□□□□ -1.34
NIPBL-203ENST00000503274 CCNB3Q8WWL7 1395 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 PLEKHH2Q8IVE3 1493 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 LMTK3Q96Q04 1460 aa6.66□□□□□ -1.34
NIPBL-203ENST00000503274 MASP2O00187 686 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 PCDH17O14917 1159 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 FYB1O15117 783 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 SKAP2O75563 359 aaPredicted RBP6.65□□□□□ -1.34
NIPBL-203ENST00000503274 USP1O94782 785 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 ANXA6P08133 673 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 GALNSP34059 522 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 ALDH18A1P54886 795 aaKnown RBP6.65□□□□□ -1.34
NIPBL-203ENST00000503274 ICA1Q05084 483 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 PTK2BQ14289 1009 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 CSHL1Q14406 222 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 KCNB1Q14721 858 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 PFKFB4Q16877 469 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 GATAD2AQ86YP4 633 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 FAM71BQ8TC56 605 aa6.65□□□□□ -1.34
NIPBL-203ENST00000503274 KDM5CP41229 1560 aa6.65□□□□□ -1.35
NIPBL-203ENST00000503274 CDC42BPBQ9Y5S2 1711 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-203ENST00000503274 LGALS16A8MUM7 142 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 TMEM232C9JQI7 657 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 NPC1O15118 1278 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 CTIFO43310 598 aaKnown RBP6.64□□□□□ -1.35
NIPBL-203ENST00000503274 TAF5LO75529 589 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 MBPP02686 304 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-203ENST00000503274 CYP2A6P11509 494 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-203ENST00000503274 FBLP22087 321 aaKnown RBP6.64□□□□□ -1.35
NIPBL-203ENST00000503274 JAK3P52333 1124 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 ZACNQ401N2 412 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 STYXQ8WUJ0 223 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 ADGRE3Q9BY15 652 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 VPS4AQ9UN37 437 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 PCDHB2Q9Y5E7 798 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 CNTLNQ9NXG0 1405 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 KIAA1107Q9UPP5 1409 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 TRAPPC8Q9Y2L5 1435 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 ARHGEF12Q9NZN5 1544 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 PREX2Q70Z35 1606 aa6.64□□□□□ -1.35
NIPBL-203ENST00000503274 ASNA1O43681 348 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 LATS1O95835 1130 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 LDHAP00338 332 aaKnown RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 ITGA5P08648 1049 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 PDIA3P30101 505 aaKnown RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 ABCC1P33527 1531 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 IGHMBP2P38935 993 aaKnown RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 C21orf58P58505 322 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 RAE1P78406 368 aaKnown RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 GRM4Q14833 912 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 AWAT1Q58HT5 328 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 UHRF1BP1Q6BDS2 1440 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 MSANTD2Q6P1R3 559 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 RANBP10Q6VN20 620 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 KRT27Q7Z3Y8 459 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 ENAHQ8N8S7 591 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 C8orf58Q8NAV2 365 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 PMM1Q92871 262 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 HIC2Q96JB3 615 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 FLRT1Q9NZU1 646 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 SEMA5BQ9P283 1151 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 REREQ9P2R6 1566 aa6.63□□□□□ -1.35
NIPBL-203ENST00000503274 GPATCH8Q9UKJ3 1502 aaKnown RBP6.63□□□□□ -1.35
NIPBL-203ENST00000503274 AGLP35573 1532 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 CCDC187A0A096LP49 1063 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 CYP2D6P10635 497 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 ALADP13716 330 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 MATN1P21941 496 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 DUSP1P28562 367 aa6.62□□□□□ -1.35
NIPBL-203ENST00000503274 WDR5P61964 334 aaKnown RBP6.62□□□□□ -1.35
NIPBL-203ENST00000503274 GALNT1Q10472 559 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-203ENST00000503274 C10orf62Q5T681 223 aaPredicted RBP6.62□□□□□ -1.35
NIPBL-203ENST00000503274 ACSM6Q6P461 480 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms