RNA–Protein interactions for RNA: ENST00000500090.2

YIPF3-209, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-209ENST00000500090 PGAP3Q96FM1 320 aaPredicted RBP12.74□□□□□ -0.37
YIPF3-209ENST00000500090 BTN2A3PQ96KV6 586 aa12.74□□□□□ -0.37
YIPF3-209ENST00000500090 FCRL2Q96LA5 508 aaPredicted RBP12.74□□□□□ -0.37
YIPF3-209ENST00000500090 NPY6RQ99463 290 aa12.74□□□□□ -0.37
YIPF3-209ENST00000500090 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
YIPF3-209ENST00000500090 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
YIPF3-209ENST00000500090 RBSNQ9H1K0 784 aa12.74□□□□□ -0.37
YIPF3-209ENST00000500090 SIGLEC16A6NMB1 481 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 NEDD8-MDP1E9PL57 170 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 GOLGA8SH3BPF8 625 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 M0QYT0 321 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 PENKP01210 267 aaPredicted RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 KRT3P12035 628 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 SKILP12757 684 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ABCB4P21439 1286 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 PPP2R5DQ14738 602 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ZC3H12AQ5D1E8 599 aaKnown RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ACBD5Q5T8D3 534 aaPredicted RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 HGSNATQ68CP4 663 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 SND1Q7KZF4 910 aaKnown RBP eCLIP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 MCOLN2Q8IZK6 566 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ATP6V0D2Q8N8Y2 350 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 RNF34Q969K3 372 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 FBRSL1Q9HCM7 1045 aaKnown RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ARHGEF4Q9NR80 690 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 ZNHIT6Q9NWK9 470 aaKnown RBP12.73□□□□□ -0.37
YIPF3-209ENST00000500090 FBXO10Q9UK96 956 aa12.73□□□□□ -0.37
YIPF3-209ENST00000500090 KMT2EQ8IZD2 1858 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 ANKRD62A6NC57 917 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 KCNU1A8MYU2 1149 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 GFRA2O00451 464 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 DDX3XO00571 662 aaKnown RBP eCLIP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 ATG13O75143 517 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 RTN2O75298 545 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 TULP3O75386 442 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 KAT7O95251 611 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 EGFP01133 1207 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 FTLP02792 175 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 COL9A1P20849 921 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 FLT3P36888 993 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 SLC6A11P48066 632 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 PITX1P78337 314 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 NME3Q13232 169 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 BRMS1LQ5PSV4 323 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 FYB2Q5VWT5 728 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 GRAMD4Q6IC98 578 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 C12orf40Q86WS4 652 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 SPEM1Q8N4L4 309 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 OLIG1Q8TAK6 271 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 DNAJC7Q99615 494 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 SELENOOQ9BVL4 669 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 METTL5Q9NRN9 209 aaKnown RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 RBM12Q9NTZ6 932 aaKnown RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 DNAJC17Q9NVM6 304 aaKnown RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 SPATA6Q9NWH7 488 aaPredicted RBP12.72□□□□□ -0.37
YIPF3-209ENST00000500090 COL4A3Q01955 1670 aa12.72□□□□□ -0.37
YIPF3-209ENST00000500090 TYW5A2RUC4 315 aaKnown RBP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 TBC1D3BA6NDS4 549 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 C2CD4BA6NLJ0 364 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 CHURC1-FNTBB4DL54 471 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 ENDOD1O94919 500 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 MYBL1P10243 752 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 PDGFRAP16234 1089 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 SDC4P31431 198 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 CXCR3P49682 368 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 SULT1E1P49888 294 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 CCR3P51677 355 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 PTPN5P54829 565 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 DEUP1Q05D60 604 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 MTAPQ13126 283 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 E2F5Q15329 346 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 HSF5Q4G112 596 aaPredicted RBP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 FAM133BQ5BKY9 247 aaKnown RBP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 PIK3R6Q5UE93 754 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 DNAJC24Q6P3W2 148 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 BNIPLQ7Z465 357 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 CNGA4Q8IV77 575 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 RXFP2Q8WXD0 754 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 BHMTQ93088 406 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 TRIM11Q96F44 468 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 TBCBQ99426 244 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.71□□□□□ -0.37
YIPF3-209ENST00000500090 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 PARVAQ9NVD7 372 aa12.71□□□□□ -0.37
YIPF3-209ENST00000500090 TAS2R14Q9NYV8 317 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms