RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CLEC17A	Q6ZS10	378 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	CYP2U1	Q7Z449	544 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	TRMT11	Q7Z4G4	463 aa	Known RBP	11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	SCD5	Q86SK9	330 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	C12orf40	Q86WS4	652 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	ADGRG2	Q8IZP9	1017 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	UBR7	Q8N806	425 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	ZBTB44	Q8NCP5	570 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	TFAP2B	Q92481	460 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	EDEM1	Q92611	657 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	PLD4	Q96BZ4	506 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	NOX5	Q96PH1	765 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	TUBGCP2	Q9BSJ2	902 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	EPC1	Q9H2F5	836 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	CNGB3	Q9NQW8	809 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	ABCC13	Q9NSE7	274 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	WDR35	Q9P2L0	1181 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	USP18	Q9UMW8	372 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	USP3	Q9Y6I4	520 aa		11.15	□□□□□ -0.62
CDK11A-222	ENST00000498810	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	MYO18A	Q92614	2054 aa	Known RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	GTPBP10	A4D1E9	387 aa	Known RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CAPN9	O14815	690 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	HOXC11	O43248	304 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	STC2	O76061	302 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	KLF8	O95600	359 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CALCA	P01258	141 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	SLC9A1	P19634	815 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CNR2	P34972	360 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	ACADSB	P45954	432 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	SLC6A11	P48066	632 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	DGKG	P49619	791 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	DGKE	P52429	567 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	ARID5A	Q03989	594 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CLN3	Q13286	438 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CNGA2	Q16280	664 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	VWA3B	Q502W6	1294 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	EOGT	Q5NDL2	527 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	SDE2	Q6IQ49	451 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	GJB7	Q6PEY0	223 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	HTR3D	Q70Z44	454 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	SYT13	Q7L8C5	426 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	PRICKLE2	Q7Z3G6	844 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	TMEM25	Q86YD3	366 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	DENND1C	Q8IV53	801 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	FMNL3	Q8IVF7	1028 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	KIAA2013	Q8IYS2	634 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	PGBD3	Q8N328	593 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	VWA5B2	Q8N398	1253 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	PHTF2	Q8N3S3	785 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	CCDC33	Q8N5R6	958 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	LMO3	Q8TAP4	145 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	KCTD13	Q8WZ19	329 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	KREMEN1	Q96MU8	473 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	TRIM62	Q9BVG3	475 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	NDST4	Q9H3R1	872 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	SYNC	Q9H7C4	482 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	ANO10	Q9NW15	660 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	NFE2L3	Q9Y4A8	694 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	FAM186A	A6NE01	2351 aa		11.14	□□□□□ -0.63
CDK11A-222	ENST00000498810	TYW5	A2RUC4	315 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810		K7ESF4	209 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	MEN1	O00255	615 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	LILRB5	O75023	590 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	TULP3	O75386	442 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	RPP40	O75818	363 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	LTF	P02788	710 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	TDGF1	P13385	188 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	NCAM1	P13591	858 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	EEF1G	P26641	437 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	GBP1	P32455	592 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	SNX16	P57768	344 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	DAOA	P59103	153 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	MRPS21	P82921	87 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	DMWD	Q09019	674 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	FKBP15	Q5T1M5	1219 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	CCDC183	Q5T5S1	534 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	BSPRY	Q5W0U4	402 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	LAIR1	Q6GTX8	287 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	ANO7	Q6IWH7	933 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	PMF1	Q6P1K2	205 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	WDR5B	Q86VZ2	330 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	PASD1	Q8IV76	773 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	CAMKK1	Q8N5S9	505 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	ALLC	Q8N6M5	410 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	TERB1	Q8NA31	727 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	TXNDC5	Q8NBS9	432 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	GPT2	Q8TD30	523 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	IPO4	Q8TEX9	1081 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	USP33	Q8TEY7	942 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	DDI1	Q8WTU0	396 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	IRGQ	Q8WZA9	623 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	NDRG1	Q92597	394 aa	Known RBP	11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	WBP2	Q969T9	261 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	SPACA7	Q96KW9	195 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	HSFY1	Q96LI6	401 aa		11.13	□□□□□ -0.63
CDK11A-222	ENST00000498810	CNTNAP3B	Q96NU0	1288 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms