RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SETQ01105 290 aaPredicted RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 CYP4A11Q02928 519 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 TYRO3Q06418 890 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 BNIP3Q12983 259 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 SLC39A14Q15043 492 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 CALCRLQ16602 461 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 Q4G0T1 1027 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 CEP55Q53EZ4 464 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 PDLIM3Q53GG5 364 aaPredicted RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 PRR16Q569H4 304 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 CC2D1AQ6P1N0 951 aaPredicted RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 NIPA1Q7RTP0 329 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 DTX1Q86Y01 620 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 TREML1Q86YW5 311 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 WDR36Q8NI36 951 aaKnown RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 CRYGNQ8WXF5 182 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 SNX19Q92543 992 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 SCAND2PQ9GZW5 306 aaPredicted RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 SAP130Q9H0E3 1048 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 ZNF302Q9NR11 478 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 TDP1Q9NUW8 608 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 NDFIP2Q9NV92 336 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 DDX25Q9UHL0 483 aaKnown RBP5.55□□□□□ -1.52
FXN-205ENST00000498653 GIT1Q9Y2X7 761 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 PCDHGB6Q9Y5F9 930 aa5.55□□□□□ -1.52
FXN-205ENST00000498653 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 IGLV3-22A0A075B6J6 115 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 FAM86B1E9PN63 330 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 GOLGA6L22H0YM25 854 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TMEM189-UBE2V1I3L0A0 370 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TBX3O15119 743 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 SPTLC2O15270 562 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 YKT6O15498 198 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 MAFGO15525 162 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 SLC37A4O43826 429 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 RPLP1P05386 114 aaKnown RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 HEXAP06865 529 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 FAM86B2P0C5J1 330 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 OR52Z1P0C646 297 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 PCSK2P16519 638 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 PROZP22891 400 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 AKAP5P24588 427 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 SSTR2P30874 369 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 PRPHP41219 470 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ME1P48163 572 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 IFNAR2P48551 515 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ATP2C1P98194 919 aaPredicted RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 KDSRQ06136 332 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 BFSP1Q12934 665 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ZRANB3Q5FWF4 1079 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 FAM160B1Q5W0V3 765 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ARL6IP4Q66PJ3 421 aaKnown RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 KIAA1324Q6UXG2 1013 aaKnown RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 CLEC17AQ6ZS10 378 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TRMT1LQ7Z2T5 733 aaKnown RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 TMEM150AQ86TG1 271 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ZNF410Q86VK4 478 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 SLFN12Q8IYM2 578 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 C4orf32Q8N8J7 132 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 LINC00301Q8NCQ3 95 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 C3orf58Q8NDZ4 430 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TTC16Q8NEE8 873 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 LEO1Q8WVC0 666 aaPredicted RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 PSMG2Q969U7 264 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 GRAMD1AQ96CP6 724 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ZNF577Q9BSK1 485 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TMEM60Q9H2L4 133 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 MINDY3Q9H8M7 445 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 IFT122Q9HBG6 1241 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 TCEAL9Q9UHQ7 104 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 FBXL5Q9UKA1 691 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 RCOR1Q9UKL0 485 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 MORC2Q9Y6X9 1032 aaPredicted RBP5.54□□□□□ -1.52
FXN-205ENST00000498653 ZGRF1Q86YA3 2104 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 ZANQ9Y493 2812 aa5.54□□□□□ -1.52
FXN-205ENST00000498653 SONP18583 2426 aaKnown RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 LY6G6EA0A0G2JKS1 128 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 GOLGA6L4A6NEF3 574 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 PTGESO14684 152 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 VILLO15195 856 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 MSH4O15457 936 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 SPRY1O43609 319 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 ZG16O60844 167 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 GAS7O60861 476 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 CUTAO60888 179 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 PPP6R2O75170 966 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 IGLV3-19P01714 112 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 PDGFAP04085 211 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 APODP05090 189 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 CYP17A1P05093 508 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 TGM2P21980 687 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 PCSK6P29122 969 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 MARCKSP29966 332 aaPredicted RBP5.53□□□□□ -1.52
FXN-205ENST00000498653 AVPR1AP37288 418 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 TXKP42681 527 aa5.53□□□□□ -1.52
FXN-205ENST00000498653 NOP2P46087 812 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms