RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CNGA3Q16281 694 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 TRIM71Q2Q1W2 868 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 SUPT20HL1Q3ZLR7 823 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 MTX3Q5HYI7 312 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 MEX3CQ5U5Q3 659 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 PGBD2Q6P3X8 592 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 ACSM6Q6P461 480 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 KRT27Q7Z3Y8 459 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 SKAP1Q86WV1 359 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 ZNF527Q8NB42 609 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 OR52L2PQ8NGH6 319 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 OSR1Q8TAX0 266 aaPredicted RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 SLC39A13Q96H72 371 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 PRPF18Q99633 342 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 WDR12Q9GZL7 423 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 NUAK2Q9H093 628 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 EPS8L2Q9H6S3 715 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 FSCN3Q9NQT6 498 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 FBXO28Q9NVF7 368 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 SLC52A1Q9NWF4 448 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 IGSF9Q9P2J2 1179 aa3.31□□□□□ -1.88
RIF1-212ENST00000498041 SCAF8Q9UPN6 1271 aaKnown RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 HEMK1Q9Y5R4 338 aaPredicted RBP3.31□□□□□ -1.88
RIF1-212ENST00000498041 ZNF644Q9H582 1327 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 A0A087WV62 115 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 CCDC187A0A096LP49 1063 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 DNAJC9-AS1A6NH13 148 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 KRTAP29-1A8MX34 341 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 FCHO1O14526 889 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 PCDH17O14917 1159 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 BCAR3O75815 825 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ITGA5P08648 1049 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ALADP13716 330 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 TACR3P29371 465 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ARHGAP25P42331 645 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ALDH18A1P54886 795 aaKnown RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 KRTAP10-11P60412 298 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 SSBP2P81877 361 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 GHRHRQ02643 423 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 TNFAIP2Q03169 654 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 CBFBQ13951 182 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 MORC3Q14149 939 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 KPNB1Q14974 876 aaKnown RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 DAZAP2Q15038 168 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 SEC23BQ15437 767 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ELF2Q15723 593 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 FAM110CQ1W6H9 321 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 MORN5Q5VZ52 161 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ZNF626Q68DY1 528 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ANO7Q6IWH7 933 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 MSANTD2Q6P1R3 559 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 C1orf228Q6PIY5 440 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 GATAD2AQ86YP4 633 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 CNGA4Q8IV77 575 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 NRSN1Q8IZ57 195 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 WDR60Q8WVS4 1066 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 AKAP1Q92667 903 aaKnown RBP eCLIP3.3□□□□□ -1.88
RIF1-212ENST00000498041 MAP4K1Q92918 833 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 MPHOSPH6Q99547 160 aaKnown RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 PAAF1Q9BRP4 392 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 PLCB1Q9NQ66 1216 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 ARL8BQ9NVJ2 186 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 KLHL13Q9P2N7 655 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 PI4KBQ9UBF8 816 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 UBE2J1Q9Y385 318 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 DAAM1Q9Y4D1 1078 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 SIRT4Q9Y6E7 314 aaPredicted RBP3.3□□□□□ -1.88
RIF1-212ENST00000498041 CTTNBP2Q8WZ74 1663 aa3.3□□□□□ -1.88
RIF1-212ENST00000498041 COL3A1P02461 1466 aaPredicted RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 GXYLT2A0PJZ3 443 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 WDR91A4D1P6 747 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 AQP12BA6NM10 295 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 KCNU1A8MYU2 1149 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 M0QZQ0 153 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 SKAP2O75563 359 aaPredicted RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 ATP5F1P24539 256 aaPredicted RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 HOXD12P35452 270 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 VPS41P49754 854 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 RHBDL3P58872 404 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 HSF1Q00613 529 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 PTK2BQ14289 1009 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 GRM4Q14833 912 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 RINT1Q6NUQ1 792 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 GGT6Q6P531 493 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 SLC2A7Q6PXP3 512 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 MYLK4Q86YV6 388 aaPredicted RBP3.29□□□□□ -1.88
RIF1-212ENST00000498041 SPICE1Q8N0Z3 855 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 FAM71BQ8TC56 605 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 SLC22A17Q8WUG5 538 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 P2RY11Q96G91 374 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 FAR2Q96K12 515 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 SENP7Q9BQF6 1050 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 CRB3Q9BUF7 120 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 SLC29A3Q9BZD2 475 aa3.29□□□□□ -1.88
RIF1-212ENST00000498041 TP63Q9H3D4 680 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms