RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 RIN3Q8TB24 985 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 FAM71BQ8TC56 605 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 NTAN1Q96AB6 310 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 HAUS1Q96CS2 278 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 ZSWIM3Q96MP5 696 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 SERPINB11Q96P15 392 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 CALN1Q9BXU9 219 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 OSBPL8Q9BZF1 889 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 SIK2Q9H0K1 926 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 OLA1Q9NTK5 396 aaKnown RBP16.56■□□□□ 0.24
PTK7-220ENST00000497957 ETNK2Q9NVF9 386 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 ZDHHC7Q9NXF8 308 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 CWC15Q9P013 229 aaKnown RBP16.56■□□□□ 0.24
PTK7-220ENST00000497957 DNMT3LQ9UJW3 386 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
PTK7-220ENST00000497957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTK7-220ENST00000497957 PGRMC1O00264 195 aaKnown RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 F9P00740 461 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 KLKB1P03952 638 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 AMPD1P23109 780 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 SCAPQ12770 1279 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 SEMA3BQ13214 749 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 NAA30Q147X3 362 aaPredicted RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 DPYSL2Q16555 572 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 GPR158Q5T848 1215 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 B4GALNT4Q76KP1 1039 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 RFX6Q8HWS3 928 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 ZNF276Q8N554 614 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 NOA1Q8NC60 698 aaKnown RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 ST13P5Q8NFI4 369 aaPredicted RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 PCDH19Q8TAB3 1148 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 LRRN4Q8WUT4 740 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 ATG4AQ8WYN0 398 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 RBM41Q96IZ5 413 aaKnown RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 RBM12Q9NTZ6 932 aaKnown RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 SAE1Q9UBE0 346 aaPredicted RBP16.55■□□□□ 0.24
PTK7-220ENST00000497957 NEU3Q9UQ49 428 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 CPQQ9Y646 472 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 HS3ST4Q9Y661 456 aa16.55■□□□□ 0.24
PTK7-220ENST00000497957 A0A1W2PPC1 479 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CREB3O43889 395 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 XYLBO75191 536 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 TBX10O75333 385 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 STC2O76061 302 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 OLFM2O95897 454 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 DESP17661 470 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CDC25CP30307 473 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 TUBP50607 506 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 KLF1Q13351 362 aaPredicted RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 ADAM15Q13444 863 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 PPP2R5DQ14738 602 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 ANKRD20A8PQ5CZ79 823 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 EFHC2Q5JST6 749 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CCDC181Q5TID7 509 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 ANKRD54Q6NXT1 300 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 SND1Q7KZF4 910 aaKnown RBP eCLIP16.54■□□□□ 0.246e-9■■□□□ 14.2
PTK7-220ENST00000497957 Q7L0L9 218 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 TP53INP2Q8IXH6 220 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CCDC33Q8N5R6 958 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 PRELID2Q8N945 189 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 C1orf54Q8WWF1 131 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 MRPS31Q92665 395 aaKnown RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CDCA3Q99618 268 aaPredicted RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 NCAPGQ9BPX3 1015 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 NACA2Q9H009 215 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 PIDD1Q9HB75 910 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 CLEC1BQ9P126 229 aa16.54■□□□□ 0.24
PTK7-220ENST00000497957 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTK7-220ENST00000497957 TTC7AQ9ULT0 858 aaPredicted RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
PTK7-220ENST00000497957 TRDMT1O14717 391 aaKnown RBP16.53■□□□□ 0.24
PTK7-220ENST00000497957 GREM1O60565 184 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 MAP3K6O95382 1288 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 PECAM1P16284 738 aaPredicted RBP16.53■□□□□ 0.24
PTK7-220ENST00000497957 HDCP19113 662 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 IGFBP4P22692 258 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 CCR1P32246 355 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
PTK7-220ENST00000497957 TFDP3Q5H9I0 405 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 BRMS1LQ5PSV4 323 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 RAP1GAP2Q684P5 730 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 RTL10Q7L3V2 364 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 ZNF572Q7Z3I7 529 aaPredicted RBP16.53■□□□□ 0.24
PTK7-220ENST00000497957 ZNF683Q8IZ20 524 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 SPATA4Q8NEY3 305 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 FAF2Q96CS3 445 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 RNF157Q96PX1 679 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 C10orf88Q9H8K7 445 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 SFXN1Q9H9B4 322 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 CCL26Q9Y258 94 aa16.53■□□□□ 0.24
PTK7-220ENST00000497957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.52■□□□□ 0.24
PTK7-220ENST00000497957 KRIT1O00522 736 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms