RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 REXO5Q96IC2 774 aaKnown RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 FAR2Q96K12 515 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 PRR25Q96S07 402 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 CINPQ9BW66 212 aaPredicted RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 NOD2Q9HC29 1040 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 RIC8AQ9NPQ8 531 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 G6PC2Q9NQR9 355 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 LIN7CQ9NUP9 197 aaKnown RBP4.57□□□□□ -1.68
SMC4-225ENST00000497203 DLL3Q9NYJ7 618 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 AMFRQ9UKV5 643 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 BAG5Q9UL15 447 aa4.57□□□□□ -1.68
SMC4-225ENST00000497203 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 KIF28PB7ZC32 967 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 B9A039 149 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 E7EVH7 732 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 H0YIZ8 118 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 SPRY2O43597 315 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 PROP1O75360 226 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 TFRCP02786 760 aaKnown RBP4.56□□□□□ -1.68
SMC4-225ENST00000497203 NPSP0C0P6 89 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 FBLP22087 321 aaKnown RBP4.56□□□□□ -1.68
SMC4-225ENST00000497203 CYP2C18P33260 490 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 SOX10P56693 466 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 E2F1Q01094 437 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 NHLH1Q02575 133 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 TLE2Q04725 743 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 TBX2Q13207 712 aaPredicted RBP4.56□□□□□ -1.68
SMC4-225ENST00000497203 SMAD1Q15797 465 aaKnown RBP4.56□□□□□ -1.68
SMC4-225ENST00000497203 CYP1B1Q16678 543 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 FAM110CQ1W6H9 321 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 DGAT2L7PQ6IED9 249 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 DPY19L3Q6ZPD9 716 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 RRAGAQ7L523 313 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 HERC6Q8IVU3 1022 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 SFTPA1Q8IWL2 248 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 TMEM57Q8N5G2 664 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 NAXEQ8NCW5 288 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 ABHD11Q8NFV4 315 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 NELL1Q92832 810 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 CTHRC1Q96CG8 243 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 WDYHV1Q96HA8 205 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 PPM1MQ96MI6 270 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 CCDC134Q9H6E4 229 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 KCNK9Q9NPC2 374 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 MGAT4CQ9UBM8 478 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 SLC13A4Q9UKG4 626 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 PCSK5Q92824 1860 aa4.56□□□□□ -1.68
SMC4-225ENST00000497203 MASP2O00187 686 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 AP4M1O00189 453 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 QSOX1O00391 747 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ZNF213O14771 459 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 AGR2O95994 175 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 C1RP00736 705 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 PYGLP06737 847 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 HNRNPCP07910 306 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC4-225ENST00000497203 FAM163BP0C2L3 166 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ENGP17813 658 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 XBP1P17861 261 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 MATN1P21941 496 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 CTGFP29279 349 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 MCM5P33992 734 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 THBS4P35443 961 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 DNASE1L3Q13609 305 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 INTS11Q5TA45 600 aaKnown RBP4.55□□□□□ -1.68
SMC4-225ENST00000497203 GRHL2Q6ISB3 625 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 SYCE2Q6PIF2 218 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ZNF788Q6ZQV5 615 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ZNF804AQ7Z570 1209 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ANKS1BQ7Z6G8 1248 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 RILPL2Q969X0 211 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 NAF1Q96HR8 494 aaKnown RBP4.55□□□□□ -1.68
SMC4-225ENST00000497203 COG8Q96MW5 612 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 DUSP22Q9NRW4 184 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 SERGEFQ9UGK8 458 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 ZBTB1Q9Y2K1 713 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 DERAQ9Y315 318 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 WNT6Q9Y6F9 365 aa4.55□□□□□ -1.68
SMC4-225ENST00000497203 AOX1Q06278 1338 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 ARHGEF17Q96PE2 2063 aaPredicted RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 LOC105369274A0A096LPK9 316 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 LOC102723532A0A0G2JNH3 316 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CCDC196A0A1B0GTZ2 297 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 MBD3L5A6NJ08 208 aaPredicted RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 NKX2-8O15522 239 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 SEPT4O43236 478 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 RBMXL2O75526 392 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 KRT38O76015 456 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CKMT1AP12532 417 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 RXRAP19793 462 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CD38P28907 300 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 RGS19P49795 217 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 RBM5P52756 815 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMC4-225ENST00000497203 EEFSECP57772 596 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 C21orf58P58505 322 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 VAMP2P63027 116 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 RBM6P78332 1123 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 UBE3AQ05086 875 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CCDC15Q0P6D6 951 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms