RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 RNF169Q8NCN4 708 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MSANTD4Q8NCY6 345 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 OR1N1Q8NGS0 311 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ZFPM2Q8WW38 1151 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MAML1Q92585 1016 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MRGPRX1Q96LB2 322 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 COG8Q96MW5 612 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 C8orf49Q96NF6 230 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 YME1L1Q96TA2 773 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SIL1Q9H173 461 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PRDM13Q9H4Q3 707 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 TM7SF3Q9NS93 570 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 LMBRD1Q9NUN5 540 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 TMEM140Q9NV12 185 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MOCS1Q9NZB8 636 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 TMOD4Q9NZQ9 345 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 THEGQ9P2T0 379 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 CPA4Q9UI42 421 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 MAFFQ9ULX9 164 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PCDHGB4Q9UN71 923 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 RUVBL1Q9Y265 456 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 CHST2Q9Y4C5 530 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 PCDHA3Q9Y5H8 950 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 SMG1Q96Q15 3661 aaKnown RBP4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 FBN2P35556 2912 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 BCL9O00512 1426 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 ADAMTS13Q76LX8 1427 aa4.03□□□□□ -1.76
EXOSC3-208ENST00000496910 DMXL1Q9Y485 3027 aa4.03□□□□□ -1.77
EXOSC3-208ENST00000496910 XRN1Q8IZH2 1706 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CCDC78A2IDD5 438 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 PI4K2BG5E9Z4 385 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 LEFTY2O00292 366 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SPTLC2O15270 562 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC7A4O43246 635 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ASNA1O43681 348 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 TMEM63AO94886 807 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 PRSS23O95084 383 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 TGDSO95455 350 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CSF1P09603 554 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SNRPA1P09661 255 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 TYRP14679 529 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 DPEP1P16444 411 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ZNF20P17024 532 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ATP5JP18859 108 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 GNAT2P19087 354 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ZFP36P26651 326 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CST5P28325 142 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 MAGEA10P43363 369 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CCR10P46092 362 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ADAM17P78536 824 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 PLP2Q04941 152 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CHRNDQ07001 517 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC12A1Q13621 1099 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 RASA2Q15283 850 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ARHGAP15Q53QZ3 475 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 FAM102AQ5T9C2 384 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 KAZNQ674X7 775 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ZNF585AQ6P3V2 769 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 HEATR3Q7Z4Q2 680 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 RPAINQ86UA6 219 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 TTC30AQ86WT1 665 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ANKRD35Q8N283 1001 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SH2D3CQ8N5H7 860 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 NGEFQ8N5V2 710 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 MB21D1Q8N884 522 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 GLIS1Q8NBF1 620 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 IL17RDQ8NFM7 739 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 AFG1LQ8WV93 481 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 EID2BQ96D98 161 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 LOXL4Q96JB6 756 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 CPPED1Q9BRF8 314 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 GPR63Q9BZJ6 419 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 KLC2Q9H0B6 622 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 C11orf54Q9H0W9 315 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ZWILCHQ9H900 591 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 GRPEL1Q9HAV7 217 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SACM1LQ9NTJ5 587 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 PNPOQ9NVS9 261 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SMPD4Q9NXE4 827 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 VSX1Q9NZR4 365 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SEL1LQ9UBV2 794 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 ABCF2Q9UG63 623 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 AFF4Q9UHB7 1163 aaKnown RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 TESMINQ9Y4I5 508 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 PLXNA3P51805 1871 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 BTAF1O14981 1849 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 SPTBN2O15020 2390 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 KIAA0232Q92628 1395 aa4.02□□□□□ -1.77
EXOSC3-208ENST00000496910 XDHP47989 1333 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TCRBV7S2A1N4TA0A589 114 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 HMX3A6NHT5 357 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 DRGXA6NNA5 263 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CAPN14A8MX76 684 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 CLGNO14967 610 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 GRM6O15303 877 aa4.01□□□□□ -1.77
EXOSC3-208ENST00000496910 TEX33O43247 280 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms