RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 CNGB3Q9NQW8 809 aa8.2□□□□□ -1.1
SRRM1-220ENST00000496882 ABCC13Q9NSE7 274 aa8.2□□□□□ -1.1
SRRM1-220ENST00000496882 HBS1LQ9Y450 684 aaKnown RBP8.2□□□□□ -1.1
SRRM1-220ENST00000496882 OTOGLQ3ZCN5 2332 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 EP300Q09472 2414 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 TYW5A2RUC4 315 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 DCDC2BA2VCK2 349 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 O00370 1275 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 DCLK1O15075 740 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 NPC1O15118 1278 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 SART1O43290 800 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 AP5Z1O43299 807 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 MED7O43513 233 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 GADD45BO75293 160 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ZNF217O75362 1048 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 FBXO21O94952 628 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ANP32AP39687 249 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 WASP42768 502 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 LIMK1P53667 647 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 GCNT1Q02742 428 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 SF3A2Q15428 464 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 CNGA2Q16280 664 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 CAMK4Q16566 473 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 MPPE1Q53F39 396 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 BSPRYQ5W0U4 402 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 PMS2CLQ68D20 193 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 PM20D1Q6GTS8 502 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 LCLAT1Q6UWP7 414 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 SLC36A4Q6YBV0 504 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 Q6ZNB5 142 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 RRAGAQ7L523 313 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ENOSF1Q7L5Y1 443 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ANKS1BQ7Z6G8 1248 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 FMNL3Q8IVF7 1028 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 CCDC117Q8IWD4 279 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 SFTPA1Q8IWL2 248 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 TRIM59Q8IWR1 403 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 RBBP8NLQ8NC74 664 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 EHBP1Q8NDI1 1231 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 DDI1Q8WTU0 396 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 KCTD13Q8WZ19 329 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 IRGQQ8WZA9 623 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 BAP1Q92560 729 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 DDX50Q9BQ39 737 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 EDEM2Q9BV94 578 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 TRIM62Q9BVG3 475 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 INTS2Q9H0H0 1204 aaKnown RBP8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ZDHHC4Q9NPG8 344 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ST7Q9NRC1 585 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 PLK2Q9NYY3 685 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 DACH1Q9UI36 760 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 RWDD2AQ9UIY3 292 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 GVINP1Q7Z2Y8 2422 aa8.19□□□□□ -1.1
SRRM1-220ENST00000496882 ATG2BQ96BY7 2078 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 BCLAF3A2AJT9 711 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 TULP2O00295 520 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 GFRA2O00451 464 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 KHNYNO15037 678 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 GDF9O60383 454 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 SYNCRIPO60506 623 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 GREM1O60565 184 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 PRMT3O60678 531 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 ADAM23O75077 832 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 NDUFS2O75306 463 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 LATS1O95835 1130 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 LTFP02788 710 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 P2RY2P41231 377 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 ACADSBP45954 432 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 MTIF2P46199 727 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 SLC11A2P49281 568 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 RGS7P49802 495 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 ZNF132P52740 706 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 MFAP3P55082 362 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 DAOAP59103 153 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 MESP2Q0VG99 397 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 PPM1JQ5JR12 505 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 SPDYCQ5MJ68 293 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 DAB2IPQ5VWQ8 1189 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 LYSMD4Q5XG99 296 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 RABEPKQ7Z6M1 372 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 FAM114A1Q8IWE2 563 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 UNC45BQ8IWX7 931 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 SCML4Q8N228 414 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 CPXM2Q8N436 756 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 UBR7Q8N806 425 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 ZNF557Q8N988 423 aaPredicted RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 RLN3Q8WXF3 142 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 EDEM1Q92611 657 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 PIGKQ92643 395 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 FAM149B1Q96BN6 582 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 HSFY1Q96LI6 401 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 NUSAP1Q9BXS6 441 aaKnown RBP8.18□□□□□ -1.1
SRRM1-220ENST00000496882 SLC2A11Q9BYW1 496 aa8.18□□□□□ -1.1
SRRM1-220ENST00000496882 CIPCQ9C0C6 399 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms