RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 CHCHD4Q8N4Q1 142 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 BPIFB6Q8NFQ5 453 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 C9orf16Q9BUW7 83 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 MROQ9BYG7 248 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 GANQ9H2C0 597 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 SUCOQ9UBS9 1254 aaKnown RBP8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 ORC6Q9Y5N6 252 aa8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.4□□□□□ -1.06
CRNKL1-205ENST00000496549 PNMA8CA0A1B0GUJ8 204 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 CSPG5O95196 566 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 KRT1P04264 644 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 YES1P07947 543 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 COX4I1P13073 169 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 RRM1P23921 792 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 GARSP41250 739 aaKnown RBP8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 PPP2R5DQ14738 602 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 COL19A1Q14993 1142 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 KIAA1841Q6NSI8 718 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 KCTD8Q6ZWB6 473 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 CCDC60Q8IWA6 550 aaPredicted RBP8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 NDUFAF2Q8N183 169 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 PPM1KQ8N3J5 372 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 ETNPPLQ8TBG4 499 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 TBC1D15Q8TC07 691 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 USP13Q92995 863 aaPredicted RBP8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 ASPSCR1Q9BZE9 553 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 KIAA1257Q9ULG3 409 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 SHOC2Q9UQ13 582 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 TBC1D30Q9Y2I9 924 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDHA3Q9Y5H8 950 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 DGKBQ9Y6T7 804 aa8.4□□□□□ -1.07
CRNKL1-205ENST00000496549 TRPC5OSA6NMA1 111 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 KPNA7A9QM74 516 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RHOBTB1O94844 696 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 NR3C1P04150 777 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PCCAP05165 728 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PKLRP30613 574 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SERPINB5P36952 375 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CYP2J2P51589 502 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TOP3AQ13472 1001 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 POLD3Q15054 466 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PON2Q15165 354 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TAF5Q15542 800 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 INSCQ1MX18 579 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIM60Q495X7 471 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TTBK2Q6IQ55 1244 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ADAMTS16Q8TE57 1224 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 JPH3Q8WXH2 748 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 HSPH1Q92598 858 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 APBB2Q92870 758 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TCF12Q99081 682 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RBM38Q9H0Z9 239 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SERHL2Q9H4I8 314 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 C12orf10Q9HB07 376 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 GRID1Q9ULK0 1009 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 STRCP1A6NGW2 1772 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 MAP2P11137 1827 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 A6NL46 340 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 TRIM24O15164 1050 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RGS5O15539 181 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ZW10O43264 779 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PDE8AO60658 829 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 OR7A10O76100 309 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ASNSP08243 561 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CES1P23141 567 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 HADHAP40939 763 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 APOFQ13790 326 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CCNIQ14094 377 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 KNOP1Q1ED39 458 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 HABP4Q5JVS0 413 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 FAM91A1Q658Y4 838 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PAOXQ6QHF9 649 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 FKBP9P1Q75LS8 142 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 HDDC2Q7Z4H3 204 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RALGPS2Q86X27 583 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CADM3Q8N126 398 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RNF148Q8N7C7 305 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 DENND1AQ8TEH3 1009 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PEX13Q92968 403 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 QKIQ96PU8 341 aaKnown RBP eCLIP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RTKNQ9BST9 563 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDHA12Q9UN75 941 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 DCAF8L1A6NGE4 600 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 ANGPT2O15123 496 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 CLIC2O15247 247 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 RFPL2O75678 378 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 NOL4O94818 638 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 NTRK1P04629 796 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PIM1P11309 404 aaPredicted RBP8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 PCNAP12004 261 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 AOC1P19801 751 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 GRIK1P39086 918 aa8.39□□□□□ -1.07
CRNKL1-205ENST00000496549 BTDP43251 543 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms