RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ST6GAL1P15907 406 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 SLC8A1P32418 973 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 HOXD12P35452 270 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 CPA2P48052 419 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 MTA1Q13330 715 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 STIM1Q13586 685 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 C16orf89Q6UX73 402 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 ANKRD13BQ86YJ7 626 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 IGFBPL1Q8WX77 278 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 CELF1Q92879 486 aaKnown RBP6.52□□□□□ -1.37
SF3B1-212ENST00000496458 GJA10Q969M2 543 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 TRMT61AQ96FX7 289 aaKnown RBP6.52□□□□□ -1.37
SF3B1-212ENST00000496458 ELAC2Q9BQ52 826 aaKnown RBP6.52□□□□□ -1.37
SF3B1-212ENST00000496458 SENP7Q9BQF6 1050 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 FBXO28Q9NVF7 368 aa6.52□□□□□ -1.37
SF3B1-212ENST00000496458 SLC22A23A1A5C7 686 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 C2CD4BA6NLJ0 364 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 SOCS2O14508 198 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 PIP5K1BO14986 540 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 TLR2O60603 784 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 IGKV2-30P06310 120 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 ITGA5P08648 1049 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 CD63P08962 238 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 IFIT2P09913 472 aaKnown RBP6.51□□□□□ -1.37
SF3B1-212ENST00000496458 PRF1P14222 555 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 RPS6KB1P23443 525 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 HOXA7P31268 230 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-212ENST00000496458 STAT6P42226 847 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 AGTR2P50052 363 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 KRTAP10-11P60412 298 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 CBFBQ13951 182 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 DGKKQ5KSL6 1271 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 XRRA1Q6P2D8 792 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 DEF8Q6ZN54 512 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 RBM44Q6ZP01 1051 aaKnown RBP6.51□□□□□ -1.37
SF3B1-212ENST00000496458 MRPL10Q7Z7H8 261 aaKnown RBP6.51□□□□□ -1.37
SF3B1-212ENST00000496458 SYTL1Q8IYJ3 562 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 NRACQ8N912 160 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 PMM1Q92871 262 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 TMEM79Q9BSE2 394 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 ELOVL1Q9BW60 279 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 NLRC4Q9NPP4 1024 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 CHST12Q9NRB3 414 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 CDC23Q9UJX2 597 aa6.51□□□□□ -1.37
SF3B1-212ENST00000496458 UBE2J1Q9Y385 318 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-212ENST00000496458 ZMYM2Q9UBW7 1377 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-212ENST00000496458 GLP2RO95838 553 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 BMP15O95972 392 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 NR4A2P43354 598 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 BTKQ06187 659 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 GRM4Q14833 912 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 ZNF793Q6ZN11 406 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 RFX6Q8HWS3 928 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 UEVLDQ8IX04 471 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 CCDC146Q8IYE0 955 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 ACRBPQ8NEB7 543 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 SVIPQ8NHG7 77 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 SLC22A17Q8WUG5 538 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 NPIPB3Q92617 1050 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 HMCESQ96FZ2 354 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 P2RY11Q96G91 374 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 ZNF845Q96IR2 970 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-212ENST00000496458 GATA5Q9BWX5 397 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-212ENST00000496458 IGSF9Q9P2J2 1179 aa6.5□□□□□ -1.37
SF3B1-212ENST00000496458 GXYLT2A0PJZ3 443 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 NTSR2O95665 410 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 ANXA6P08133 673 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 STARD3Q14849 445 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 TRIM71Q2Q1W2 868 aaKnown RBP6.49□□□□□ -1.37
SF3B1-212ENST00000496458 EARS2Q5JPH6 523 aaKnown RBP6.49□□□□□ -1.37
SF3B1-212ENST00000496458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.49□□□□□ -1.37
SF3B1-212ENST00000496458 LAS2Q8IYD9 372 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 ASB12Q8WXK4 309 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 MCRS1Q96EZ8 462 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 TRIM2Q9C040 744 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 ARFGAP3Q9NP61 516 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 PCDHB7Q9Y5E2 793 aa6.49□□□□□ -1.37
SF3B1-212ENST00000496458 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
SF3B1-212ENST00000496458 USP12O75317 370 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 NPPBP16860 134 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 PPM1AP35813 382 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 TECP42680 631 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 ZNF84P51523 738 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 ALDH18A1P54886 795 aaKnown RBP6.48□□□□□ -1.37
SF3B1-212ENST00000496458 SLC12A2P55011 1212 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 DMWDQ09019 674 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 SYCP2LQ5T4T6 812 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 DHRS13Q6UX07 377 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 UBE2Q1Q7Z7E8 422 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 Q8N9P0 234 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-212ENST00000496458 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
SF3B1-212ENST00000496458 GPR78Q96P69 363 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 PRPF18Q99633 342 aaKnown RBP6.48□□□□□ -1.37
SF3B1-212ENST00000496458 PAAF1Q9BRP4 392 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 TTLL2Q9BWV7 592 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 TMEM45AQ9NWC5 275 aa6.48□□□□□ -1.37
SF3B1-212ENST00000496458 HEY2Q9UBP5 337 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms