RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SMCR8Q8TEV9 937 aaPredicted RBP4.3□□□□□ -1.72
CLK1-214ENST00000496205 OSCP1Q8WVF1 389 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 LTV1Q96GA3 475 aaPredicted RBP4.3□□□□□ -1.72
CLK1-214ENST00000496205 RTKNQ9BST9 563 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 FAM167BQ9BTA0 163 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 PAGR1Q9BTK6 254 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 HERC5Q9UII4 1024 aaKnown RBP4.3□□□□□ -1.72
CLK1-214ENST00000496205 CA14Q9ULX7 337 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 LZTS1Q9Y250 596 aa4.3□□□□□ -1.72
CLK1-214ENST00000496205 HMX3A6NHT5 357 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 RRN3P2A6NIE6 340 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 CYSRT1A8MQ03 144 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 PRR23D1E9PI22 279 aaPredicted RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 H0Y3Z8 333 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 PPP6R2O75170 966 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 RPP40O75818 363 aaKnown RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 VIPP01282 170 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 PRR23D2P0DMB1 279 aaPredicted RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 CST5P28325 142 aaPredicted RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 AKT1P31749 480 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 ADD2P35612 726 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 BMPR2Q13873 1038 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 DAZAP2Q15038 168 aaPredicted RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 PLAC9Q5JTB6 97 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 MZT2AQ6P582 158 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 KLHL17Q6TDP4 642 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 PIK3AP1Q6ZUJ8 805 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 CLASRPQ8N2M8 674 aaKnown RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 ASB12Q8WXK4 309 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 GRAMD1AQ96CP6 724 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 TMEM79Q9BSE2 394 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 MECRQ9BV79 373 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 VN1R3Q9BXE9 311 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 ARHGEF3Q9NR81 526 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 GJD2Q9UKL4 321 aa4.29□□□□□ -1.72
CLK1-214ENST00000496205 DRG1Q9Y295 367 aaKnown RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.29□□□□□ -1.72
CLK1-214ENST00000496205 LRRFIP2Q9Y608 721 aaKnown RBP4.29□□□□□ -1.72
CLK1-214ENST00000496205 CYP2D7A0A087X1C5 515 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 A1L4Q6 167 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 KIF28PB7ZC32 967 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 M0QYT0 321 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 EXOC5O00471 708 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ZSCAN9O15535 394 aaPredicted RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 SPRY2O43597 315 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 CCNT2O60583 730 aaKnown RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 CER1O95813 267 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 POLBP06746 335 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 FESP07332 822 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 IL6RP08887 468 aaPredicted RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 PEPDP12955 493 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 NDUFB7P17568 137 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 CNTFP26441 200 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 MCM5P33992 734 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 AP2B1P63010 937 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 SATB1Q01826 763 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ACOX1Q15067 660 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 CYP1B1Q16678 543 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 MIDNQ504T8 468 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 RINT1Q6NUQ1 792 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 DTX2Q86UW9 622 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ANKRD18AQ8IVF6 992 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 FTSJ3Q8IY81 847 aaKnown RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 GALNT16Q8N428 558 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 SPPL3Q8TCT6 385 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ATRIPQ8WXE1 791 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 SOCS4Q8WXH5 440 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 CTHRC1Q96CG8 243 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ZNF668Q96K58 619 aaPredicted RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 SEPSECSQ9HD40 501 aaKnown RBP4.28□□□□□ -1.72
CLK1-214ENST00000496205 PDGFCQ9NRA1 345 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 HELLSQ9NRZ9 838 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLK1-214ENST00000496205 PNMA2Q9UL42 364 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 ASAP1Q9ULH1 1129 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 AFG3L2Q9Y4W6 797 aa4.28□□□□□ -1.72
CLK1-214ENST00000496205 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PNMA6EA0A0J9YXQ4 647 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 WDHD1O75717 1129 aaPredicted RBP4.27□□□□□ -1.73
CLK1-214ENST00000496205 EPHA3P29320 983 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PRKAR1BP31321 381 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 DEUP1Q05D60 604 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 FAM110CQ1W6H9 321 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 GALNTL6Q49A17 601 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 Q4G0T1 1027 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
CLK1-214ENST00000496205 FBXO47Q5MNV8 452 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 TREML2Q5T2D2 321 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 TTC22Q5TAA0 569 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 MMS22LQ6ZRQ5 1243 aa4.27□□□□□ -1.73
CLK1-214ENST00000496205 RASGRP2Q7LDG7 609 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms