RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
HLA-A-208ENST00000496081 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
HLA-A-208ENST00000496081 H0YGN5 161 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
HLA-A-208ENST00000496081 RARGP13631 454 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 YWHAQP27348 245 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 RPL10AP62906 217 aaKnown RBP16.95■□□□□ 0.3
HLA-A-208ENST00000496081 DPYSQ14117 519 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 SLMAPQ14BN4 828 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 ARHGAP18Q8N392 663 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 RNF34Q969K3 372 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 YME1L1Q96TA2 773 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 SH3GL2Q99962 352 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 ARHGEF38Q9NXL2 777 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 DTLQ9NZJ0 730 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
HLA-A-208ENST00000496081 MSI1O43347 362 aaKnown RBP16.94■□□□□ 0.3
HLA-A-208ENST00000496081 ATF6P18850 670 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 RBL1P28749 1068 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 HCAR3P49019 387 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 DSG1Q02413 1049 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 XRCC4Q13426 336 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 RNASEH2BQ5TBB1 312 aaKnown RBP16.94■□□□□ 0.3
HLA-A-208ENST00000496081 CCDC25Q86WR0 208 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 LRRN4Q8WUT4 740 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 FBXO32Q969P5 355 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 PWWP2AQ96N64 755 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 HERC2P3Q9BVR0 1158 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 PABPC3Q9H361 631 aaKnown RBP16.94■□□□□ 0.3
HLA-A-208ENST00000496081 SEMA4AQ9H3S1 761 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 SPG21Q9NZD8 308 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 KCNN4O15554 427 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 GLUD2P49448 558 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 BRMS1LQ5PSV4 323 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 MSANTD2Q6P1R3 559 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 LRIG3Q6UXM1 1119 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 GIPC2Q8TF65 315 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 RTP4Q96DX8 246 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 COMMD8Q9NX08 183 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 OR12D3Q9UGF7 316 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 SNX10Q9Y5X0 201 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 ALPK3Q96L96 1907 aa16.94■□□□□ 0.3
HLA-A-208ENST00000496081 KIAA1671Q9BY89 1806 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 DCLK1O15075 740 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 MFSD11O43934 449 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 OPA1O60313 960 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 FGBP02675 491 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 ERCC2P18074 760 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 TPI1P60174 286 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 TAF10Q12962 218 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 MORF4L2Q15014 288 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 PAFAH1B3Q15102 231 aaKnown RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 SLC45A4Q5BKX6 768 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 RASIP1Q5U651 963 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 CDKL3Q8IVW4 592 aaPredicted RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 ZCCHC9Q8N567 271 aaKnown RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 CCDC33Q8N5R6 958 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 OR2W6PQ8NHA6 318 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 SERPINB11Q96P15 392 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 OSBPL2Q9H1P3 480 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 CLIC5Q9NZA1 410 aa16.93■□□□□ 0.3
HLA-A-208ENST00000496081 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 FARP1Q9Y4F1 1045 aaPredicted RBP16.93■□□□□ 0.3
HLA-A-208ENST00000496081 CARNS1A5YM72 827 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 SLC38A8A6NNN8 435 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 ZBBXA8MT70 800 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 NDC80O14777 642 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 ABLIM3O94929 683 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 SEC24AO95486 1093 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 CCR1P32246 355 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 ZNF135P52742 658 aaPredicted RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 FAM182AQ5T1J6 154 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 BZW1Q7L1Q6 419 aaKnown RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PCGF5Q86SE9 256 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 ZNF461Q8TAF7 563 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 CPT1BQ92523 772 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 BADQ92934 168 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 QKIQ96PU8 341 aaKnown RBP eCLIP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 CDC42EP4Q9H3Q1 356 aaKnown RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 RNF40O75150 1001 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 LRIG2O94898 1065 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PSEN1P49768 467 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 SLC29A2Q14542 456 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PPIL6Q8IXY8 311 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 TAB3Q8N5C8 712 aaPredicted RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 NAT8LQ8N9F0 302 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 NETO2Q8NC67 525 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PRCCQ92733 491 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms