RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 GRAMD4Q6IC98 578 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 ACAD10Q6JQN1 1059 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 TSSK4Q6SA08 328 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 C1orf210Q8IVY1 113 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 ETFBKMTQ8IXQ9 262 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 RPLP0P6Q8NHW5 317 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.77
CALD1-223ENST00000496024 SLC39A13Q96H72 371 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 TBCBQ99426 244 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.21□□□□□ -0.77
CALD1-223ENST00000496024 ADAM33Q9BZ11 813 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 ZDHHC4Q9NPG8 344 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 FAM86C1Q9NVL1 165 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 POLR3BQ9NW08 1133 aaPredicted RBP10.21□□□□□ -0.77
CALD1-223ENST00000496024 MARK1Q9P0L2 795 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 STIM2Q9P246 746 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 DEC1Q9P2X7 70 aa10.21□□□□□ -0.77
CALD1-223ENST00000496024 XPO7Q9UIA9 1087 aaKnown RBP10.21□□□□□ -0.77
CALD1-223ENST00000496024 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 K7EQS6 105 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 DDX3XO00571 662 aaKnown RBP eCLIP10.2□□□□□ -0.78
CALD1-223ENST00000496024 CACNG3O60359 315 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TBL1XO60907 577 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 IGLV3-25P01717 112 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CALB1P05937 261 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 PLEKP08567 350 aaPredicted RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 TPM1P09493 284 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SLC6A4P31645 630 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TIE1P35590 1138 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SCNN1AP37088 669 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 PRKCIP41743 596 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 GRIA2P42262 883 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 DGKGP49619 791 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SGSHP51688 502 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 ATXN1P54253 815 aaKnown RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 ATP11AP98196 1134 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SATB1Q01826 763 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CSTF1Q05048 431 aaKnown RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 DEUP1Q05D60 604 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TCF15Q12870 199 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CDO1Q16878 200 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 FAM133BQ5BKY9 247 aaKnown RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 C10orf76Q5T2E6 689 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 EMC10Q5UCC4 262 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 OTUD1Q5VV17 481 aaPredicted RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 FYB2Q5VWT5 728 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 RAP1GAP2Q684P5 730 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 NADSYN1Q6IA69 706 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TRNP1Q6NT89 227 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 DNAJC24Q6P3W2 148 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 ITIH6Q6UXX5 1313 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 KIAA1549LQ6ZVL6 1849 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SND1Q7KZF4 910 aaKnown RBP eCLIP10.2□□□□□ -0.78
CALD1-223ENST00000496024 MON1BQ7L1V2 547 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TMC6Q7Z403 805 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CHSY1Q86X52 802 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 PHF13Q86YI8 300 aaPredicted RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 VSTM4Q8IW00 320 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 FAM217AQ8IXS0 508 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 MCOLN2Q8IZK6 566 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CPXM2Q8N436 756 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 ATP6V0D2Q8N8Y2 350 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 JOSD2Q8TAC2 188 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 OLIG1Q8TAK6 271 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 RXFP2Q8WXD0 754 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 ATOH1Q92858 354 aaPredicted RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 IQCDQ96DY2 449 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TMA16Q96EY4 203 aaKnown RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 MYEOVQ96EZ4 313 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CFAP57Q96MR6 1250 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 NPY6RQ99463 290 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 PRRX2Q99811 253 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SYT11Q9BT88 431 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SELENOOQ9BVL4 669 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 NUCKS1Q9H1E3 243 aaKnown RBP10.2□□□□□ -0.78
CALD1-223ENST00000496024 PIGVQ9NUD9 493 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.2□□□□□ -0.78
CALD1-223ENST00000496024 C2orf42Q9NWW7 574 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 SLC12A6Q9UHW9 1150 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 TMEM59LQ9UK28 342 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 CLEC4EQ9ULY5 219 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 STAP1Q9ULZ2 295 aa10.2□□□□□ -0.78
CALD1-223ENST00000496024 ATMINO43313 823 aaPredicted RBP10.19□□□□□ -0.78
CALD1-223ENST00000496024 ADCY5O95622 1261 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 LATS1O95835 1130 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 PENKP01210 267 aaPredicted RBP10.19□□□□□ -0.78
CALD1-223ENST00000496024 SERPING1P05155 500 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 KRT3P12035 628 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 PDGFRAP16234 1089 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 ABCB4P21439 1286 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 RRM1P23921 792 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 HOXC13P31276 330 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 CCR1P32246 355 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 GGCXP38435 758 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 EIF2DP41214 584 aaKnown RBP10.19□□□□□ -0.78
CALD1-223ENST00000496024 CXCL12P48061 93 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 NUBP1P53384 320 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 PTPN5P54829 565 aa10.19□□□□□ -0.78
CALD1-223ENST00000496024 ADKP55263 362 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms