RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	RFPL1	O75677	317 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	FAM163B	P0C2L3	166 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	MLN	P12872	115 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	PTPN1	P18031	435 aa	Known RBP	15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	SERPINB9	P50453	376 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	OTUD1	Q5VV17	481 aa	Predicted RBP	15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	TWF2	Q6IBS0	349 aa	Known RBP	15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	TRMT10B	Q6PF06	316 aa	Known RBP	15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	MTDH	Q86UE4	582 aa	Known RBP	15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	AGAP11	Q8TF27	550 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	RNF139	Q8WU17	664 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	KCTD13	Q8WZ19	329 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	NT5C3B	Q969T7	300 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	NPY6R	Q99463	290 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	FERMT1	Q9BQL6	677 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	KATNAL1	Q9BW62	490 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	AP5M1	Q9H0R1	490 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	LRRC4	Q9HBW1	653 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	SAR1A	Q9NR31	198 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	KANSL3	Q9P2N6	904 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	CPA4	Q9UI42	421 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	STAP1	Q9ULZ2	295 aa		15.83	■□□□□ 0.13
CALD1-222	ENST00000495522	SF3B1	O75533	1304 aa	Known RBP eCLIP	15.83	■□□□□ 0.12
CALD1-222	ENST00000495522		A0A0G2JND7	137 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522		A8MUI8	341 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	CLDN5	O00501	218 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	UGT1A9	O60656	530 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	T-ENOL	P0DO92	83 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	GRIA1	P42261	906 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	BMPR2	Q13873	1038 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	CDHR3	Q6ZTQ4	885 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	CYS1	Q717R9	158 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	BNIPL	Q7Z465	357 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	CLNK	Q7Z7G1	428 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	TRIM42	Q8IWZ5	723 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	SIX6OS1	Q8N1H7	587 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	C2orf69	Q8N8R5	385 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	STAMBPL1	Q96FJ0	436 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	LGMN	Q99538	433 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	UGT1A7	Q9HAW7	530 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	UGT1A10	Q9HAW8	530 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	UGT1A8	Q9HAW9	530 aa		15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	TRIP12	Q14669	1992 aa	Predicted RBP	15.83	■□□□□ 0.12
CALD1-222	ENST00000495522	PTGES	O14684	152 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	OPHN1	O60890	802 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	GNAT1	P11488	350 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	CCND1	P24385	295 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	ACAT1	P24752	427 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	ARFIP2	P53365	341 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	BEX3	Q00994	111 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	STEAP4	Q687X5	459 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	ZNF449	Q6P9G9	518 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	HOMEZ	Q8IX15	550 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	COLGALT1	Q8NBJ5	622 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	DEPDC1B	Q8WUY9	529 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	UTP4	Q969X6	686 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	PPP1R10	Q96QC0	940 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	SLC2A13	Q96QE2	648 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	TRIM56	Q9BRZ2	755 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	TACO1	Q9BSH4	297 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	MED10	Q9BTT4	135 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	EIF2B3	Q9NR50	452 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	MTO1	Q9Y2Z2	717 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	SYNJ2BP-COX16	A0A087WUM0	186 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522		M0QYT0	321 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	RNF103	O00237	685 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	HNRNPCL1	O60812	293 aa	Known RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	WFS1	O76024	890 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	BEST1	O76090	585 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	CBX6	O95503	412 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	CNTF	P26441	200 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	GLUD2	P49448	558 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	PITX1	P78337	314 aa	Predicted RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	AP1B1	Q10567	949 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	PDK1	Q15118	436 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	WSCD1	Q658N2	575 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	LRRC8B	Q6P9F7	803 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	CLEC20A	Q6ZU45	233 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	PAQR9	Q6ZVX9	377 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	MOCS1	Q9NZB8	636 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	COX16	Q9P0S2	106 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	NR2E3	Q9Y5X4	410 aa		15.82	■□□□□ 0.12
CALD1-222	ENST00000495522	SDR42E2	A6NKP2	422 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	TRAFD1	O14545	582 aa	Predicted RBP	15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	GABRD	O14764	452 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	DEUP1	Q05D60	604 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	MDH1B	Q5I0G3	518 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	WNT8B	Q93098	351 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	P2RY11	Q96G91	374 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	OXNAD1	Q96HP4	312 aa	Predicted RBP	15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	TMEM120A	Q9BXJ8	343 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	HEY2	Q9UBP5	337 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	LNPEP	Q9UIQ6	1025 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522		Q9Y3F1	56 aa		15.81	■□□□□ 0.12
CALD1-222	ENST00000495522	WDR27	A2RRH5	827 aa		15.8	■□□□□ 0.12
CALD1-222	ENST00000495522		I3L4J1	428 aa		15.8	■□□□□ 0.12
CALD1-222	ENST00000495522	PPP1R12A	O14974	1030 aa	Predicted RBP	15.8	■□□□□ 0.12
CALD1-222	ENST00000495522	CREB3	O43889	395 aa		15.8	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms