RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 HESX1Q9UBX0 185 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 PLA2G4CQ9UP65 541 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 FNDC3AQ9Y2H6 1198 aaKnown RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 APC2O95996 2303 aa10.08□□□□□ -0.8
UBR4-216ENST00000494503 TP53BP1Q12888 1972 aaPredicted RBP10.08□□□□□ -0.8
UBR4-216ENST00000494503 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 DMXL2Q8TDJ6 3036 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 PTPRBP23467 1997 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 A0A1B0GVT2 93 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 FAM47DPA6NHR8 397 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 FSBPO95073 299 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 ZBED1O96006 694 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 MYL1P05976 194 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 EPB41P11171 864 aaKnown RBP10.07□□□□□ -0.8
UBR4-216ENST00000494503 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
UBR4-216ENST00000494503 KRT85P78386 507 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 ADIGQ0VDE8 80 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 ACAP1Q15027 740 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 EIF4HQ15056 248 aaKnown RBP10.07□□□□□ -0.8
UBR4-216ENST00000494503 TEAD4Q15561 434 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 HLA-BQ31612 363 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 MPPE1Q53F39 396 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 CHST9Q7L1S5 443 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 PROSER1Q86XN7 944 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 FBXL13Q8NEE6 735 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 MDM1Q8TC05 714 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 PLD4Q96BZ4 506 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 P2RY11Q96G91 374 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 TMEM176AQ96HP8 235 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 ULBP1Q9BZM6 244 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 LHX5Q9H2C1 402 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 ABCB8Q9NUT2 735 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 SFMBT1Q9UHJ3 866 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 PCOLCE2Q9UKZ9 415 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 CLEC4EQ9ULY5 219 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBR4-216ENST00000494503 TRAF3IP3Q9Y228 551 aa10.07□□□□□ -0.8
UBR4-216ENST00000494503 PLXNB3Q9ULL4 1909 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 METTL12A8MUP2 240 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 PIK3R2O00459 728 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 MSI1O43347 362 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 STX10O60499 249 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 DNTTP04053 509 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 LCP1P13796 627 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 CMA1P23946 247 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 AFF3P51826 1226 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 NDUFA8P51970 172 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 ZNF132P52740 706 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 COPAP53621 1224 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 IL9RQ01113 521 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 LRMPQ12912 555 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 SUZ12Q15022 739 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 TTC31Q49AM3 519 aaPredicted RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 SGO2Q562F6 1265 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 LAYNQ6UX15 382 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 SMYD4Q8IYR2 804 aaPredicted RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 TTC39CQ8N584 583 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 SLC4A11Q8NBS3 891 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 OR2T3Q8NH03 318 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 HNRNPLLQ8WVV9 542 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 ADAMTS14Q8WXS8 1223 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 DNASE2BQ8WZ79 361 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 SEMA4DQ92854 862 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 TATDN2Q93075 761 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 PIWIL1Q96J94 861 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 C6orf106Q9H6K1 298 aaPredicted RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 OLA1Q9NTK5 396 aaKnown RBP10.06□□□□□ -0.8
UBR4-216ENST00000494503 RAB20Q9NX57 234 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 STIM2Q9P246 746 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 RCOR1Q9UKL0 485 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 TSPAN16Q9UKR8 245 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
UBR4-216ENST00000494503 TYW5A2RUC4 315 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 EIF4E1BA6NMX2 242 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 TULP2O00295 520 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 KCNK3O14649 394 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 CETN3O15182 167 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 MAPK13O15264 365 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 FLRT2O43155 660 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 TIMM44O43615 452 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 GJB3O75712 270 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 RHOBTB3O94955 611 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 SEMA4FO95754 770 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 POLR2EP19388 210 aaKnown RBP10.05□□□□□ -0.8
UBR4-216ENST00000494503 ACSL1P33121 698 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 BCAT1P54687 386 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 RAD23BP54727 409 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 C21orf59P57076 290 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 ST8SIA6P61647 398 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 PDE4CQ08493 712 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 COL28A1Q2UY09 1125 aa10.05□□□□□ -0.8
UBR4-216ENST00000494503 TMEM215Q68D42 235 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms