RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GRIK4Q16099 956 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 CYP51A1Q16850 503 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 IZUMO2Q6UXV1 221 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 BRSK2Q8IWQ3 736 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 THAP1Q9NVV9 213 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
COL27A1-207ENST00000494090 MGAT4DA6NG13 374 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 TPBGLP0DKB5 382 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF23P17027 643 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 EIF4BP23588 611 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 GP5P40197 560 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 NFYCQ13952 458 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 SLC27A1Q6PCB7 646 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 PRDM16Q9HAZ2 1276 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 BTNL10A8MVZ5 291 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 SERPINF2P08697 491 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 ZCCHC18P0CG32 403 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 VEGFAP15692 232 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 PGAM1P18669 254 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 NDST1P52848 882 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 PRKAA2P54646 552 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 TBL3Q12788 808 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 BHMTQ93088 406 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 ZCCHC2Q9C0B9 1178 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 KLRC4O43908 158 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 RASSF9O75901 435 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 MIIPQ5JXC2 388 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 MARC1Q5VT66 337 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 OXNAD1Q96HP4 312 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 DDX43Q9NXZ2 648 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 DNPEPQ9ULA0 475 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 PKN2Q16513 984 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 PHACTR4Q8IZ21 702 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 CENPLQ8N0S6 344 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF557Q8N988 423 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 KYQ8NBH2 561 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 OSCP1Q8WVF1 389 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 CENPTQ96BT3 561 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 DDX4Q9NQI0 724 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 THG1LQ9NWX6 298 aaKnown RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 AHSPQ9NZD4 102 aa19.62■□□□□ 0.73
COL27A1-207ENST00000494090 CAB39Q9Y376 341 aaPredicted RBP19.62■□□□□ 0.73
COL27A1-207ENST00000494090 FAM47E-STBD1D6RA91 191 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 MICAL2O94851 1124 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 INSRRP14616 1297 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 DNAJB2P25686 324 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 TMC7Q7Z402 723 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 RSPH1Q8WYR4 309 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 FCHO1O14526 889 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 HMGB3O15347 200 aaKnown RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 SSTR1P30872 391 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 PRKAA1Q13131 559 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 CSHL1Q14406 222 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 STARD3Q14849 445 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 SLC30A10Q6XR72 485 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 C1orf186Q6ZWK4 172 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 RIN3Q8TB24 985 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 HTR3CQ8WXA8 447 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 OSMRQ99650 979 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 ABHD16BQ9H3Z7 469 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 KCNMB3Q9NPA1 279 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 TCF7L2Q9NQB0 619 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 BCL9O00512 1426 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 IFRD1O00458 451 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 ALADP13716 330 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 BMP6P22004 513 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 GUCA1AP43080 201 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 CDH17Q12864 832 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 GALNTL6Q49A17 601 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 NBPF12Q5TAG4 269 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 SERPINB11Q96P15 392 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 NT5MQ9NPB1 228 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 VTI1BQ9UEU0 232 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 TRHDEQ9UKU6 1024 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 UBDO15205 165 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 RTN3O95197 1032 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 AKR1A1P14550 325 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 SPANXN3Q5MJ09 141 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 DEFB107AQ8IZN7 70 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF446Q9NWS9 450 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 FKBP1AP62942 108 aaKnown RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 ZNF75CPQ92670 426 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 SMARCD1Q96GM5 515 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 UXTQ9UBK9 157 aaPredicted RBP19.61■□□□□ 0.73
COL27A1-207ENST00000494090 POLG2Q9UHN1 485 aa19.61■□□□□ 0.73
COL27A1-207ENST00000494090 CKBP12277 381 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 FCGR1AP12314 374 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CENPAP49450 140 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 TTMPQ5BVD1 217 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 ILDR2Q71H61 639 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 LRRC8DQ7L1W4 858 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 CPA4Q9UI42 421 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 DDHD2O94830 711 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 KRT6AP02538 564 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 KRT6BP04259 564 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 KRT6CP48668 564 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 NPY2RP49146 381 aa19.6■□□□□ 0.73
COL27A1-207ENST00000494090 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms