RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 IQCB1Q15051 598 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 PTPN20Q4JDL3 420 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 EMC10Q5UCC4 262 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TRIM72Q6ZMU5 477 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 FAM183BPQ6ZVS7 135 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ASCL5Q7RTU5 278 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 APTXQ7Z2E3 356 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 NOP9Q86U38 636 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 WDR5BQ86VZ2 330 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 CCDC117Q8IWD4 279 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 DEFB106AQ8N104 65 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 CCDC33Q8N5R6 958 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ALLCQ8N6M5 410 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ZNF513Q8N8E2 541 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TERB1Q8NA31 727 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TXNDC5Q8NBS9 432 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TSTD1Q8NFU3 115 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 ADAM32Q8TC27 787 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 EPS8L1Q8TE68 723 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 UCMAQ8WVF2 138 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 DDX1Q92499 740 aaKnown RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 BHMTQ93088 406 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 RNF34Q969K3 372 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 FUCA2Q9BTY2 467 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 POLMQ9NP87 494 aaPredicted RBP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TMEM51Q9NW97 253 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.26□□□□□ -1.25
TOP3A-207ENST00000493648 C2orf42Q9NWW7 574 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 RRN3Q9NYV6 651 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 TJP2Q9UDY2 1190 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 FBXO10Q9UK96 956 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 MMP17Q9ULZ9 603 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 SLC27A6Q9Y2P4 619 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 STARD13Q9Y3M8 1113 aa7.26□□□□□ -1.25
TOP3A-207ENST00000493648 GOLGA6L7A0A1B0GV03 622 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 PRRT4C9JH25 899 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 NPC1O15118 1278 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TRIM24O15164 1050 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 AXIN1O15169 862 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 EPHB6O15197 1021 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TEX33O43247 280 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 HRO43593 1189 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TIMM44O43615 452 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TBL1XO60907 577 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 GRAP2O75791 330 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 FERP16591 822 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ABCB4P21439 1286 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 NTSR1P30989 418 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SCNN1AP37088 669 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 MATKP42679 507 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 GABRB2P47870 512 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 RNASE9P60153 205 aaKnown RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ARID5AQ03989 594 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 DMWDQ09019 674 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 MESP2Q0VG99 397 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SIM2Q14190 667 aaPredicted RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 NR1I3Q14994 352 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TAF5Q15542 800 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 CRY1Q16526 586 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ZSCAN23Q3MJ62 389 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 USP39Q53GS9 565 aaKnown RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 MPP7Q5T2T1 576 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 PIK3R6Q5UE93 754 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 OLFML1Q6UWY5 402 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 CEP68Q76N32 757 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SLC26A9Q7LBE3 791 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 TAC4Q86UU9 113 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SFTPA1Q8IWL2 248 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ATP6V0D2Q8N8Y2 350 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ZNF557Q8N988 423 aaPredicted RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 IL17RCQ8NAC3 791 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 ZNF397Q8NF99 534 aaPredicted RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SLC39A13Q96H72 371 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 FCRL2Q96LA5 508 aaPredicted RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 SLC2A13Q96QE2 648 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 HHIPQ96QV1 700 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 HINFPQ9BQA5 517 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 EPC1Q9H2F5 836 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 FAM204AQ9H8W3 233 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 EBF1Q9UH73 591 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 NOCTQ9UK39 431 aaKnown RBP7.25□□□□□ -1.25
TOP3A-207ENST00000493648 STAP1Q9ULZ2 295 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 CACNA1HO95180 2353 aa7.25□□□□□ -1.25
TOP3A-207ENST00000493648 KIAA1549LQ6ZVL6 1849 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 MYO18AQ92614 2054 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SYNJ2BP-COX16A0A087WUM0 186 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 A0A1B0GTH6 734 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 A0A1W2PQC6 194 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 KCNU1A8MYU2 1149 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 M0QYT0 321 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 SGK1O00141 431 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 GFRA2O00451 464 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 DAB1O75553 588 aa7.24□□□□□ -1.25
TOP3A-207ENST00000493648 RPP40O75818 363 aaKnown RBP7.24□□□□□ -1.25
TOP3A-207ENST00000493648 MOCS2O96007 188 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms