RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 NIF3L1Q9GZT8 377 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 BTBD1Q9H0C5 482 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 MARCH2Q9P0N8 246 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 NUDT5Q9UKK9 219 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 AGO1Q9UL18 857 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 SCML1Q9UN30 329 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 PLA2G4CQ9UP65 541 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 PCDHGA1Q9Y5H4 931 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 CKAP5Q14008 2032 aa11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 GCN1Q92616 2671 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-207ENST00000493271 APC2O95996 2303 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 PTPRBP23467 1997 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 MYH10P35580 1976 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TRABD2BA6NFA1 517 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 LATS1O95835 1130 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 DNTTP04053 509 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 NR3C1P04150 777 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 MYL1P05976 194 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 PRKCHP24723 683 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 CD27P26842 260 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 CSNK1EP49674 416 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 BCAT1P54687 386 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 DLG4P78352 724 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 CYP4F3Q08477 520 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 EFEMP1Q12805 493 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 CAMK2BQ13554 666 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 PTPRNQ16849 979 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 KIF19Q2TAC6 998 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 INTS8Q75QN2 995 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 RSRC2Q7L4I2 434 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TMPRSS12Q86WS5 348 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 DENND1CQ8IV53 801 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 CEP57L1Q8IYX8 460 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 SNX19Q92543 992 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 NXPE2Q96DL1 559 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TWNKQ96RR1 684 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TMEM245Q9H330 911 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 SGK2Q9HBY8 427 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TM9SF3Q9HD45 589 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 TPX2Q9ULW0 747 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 ANKRD6Q9Y2G4 727 aa11.51□□□□□ -0.57
SNRNP200-207ENST00000493271 YKT6O15498 198 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 CALUO43852 315 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 SEMA4FO95754 770 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 ATP5BP06576 529 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 C1SP09871 688 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 HLA-EP13747 358 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 ACSL1P33121 698 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 HNF1BP35680 557 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 ABCG1P45844 678 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 VAMP7P51809 220 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 CUL4BQ13620 913 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 NFIL3Q16649 462 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 RAB41Q5JT25 222 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 ATL3Q6DD88 541 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 ADAT2Q7Z6V5 191 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 AHI1Q8N157 1196 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 LSM14AQ8ND56 463 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 P2RY11Q96G91 374 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 KCTD10Q9H3F6 313 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 FTSJ1Q9UET6 329 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 SUN2Q9UH99 717 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 STOML2Q9UJZ1 356 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 TRAF3IP3Q9Y228 551 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 HBS1LQ9Y450 684 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 SNX11Q9Y5W9 270 aa11.5□□□□□ -0.57
SNRNP200-207ENST00000493271 CELSR3Q9NYQ7 3312 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 SLC12A8A0AV02 714 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 TSPAN3O60637 253 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 HMBSP08397 361 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 KRT13P13646 458 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 CTSKP43235 329 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 AFMP43652 599 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 YWHAGP61981 247 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 RACK1P63244 317 aaKnown RBP11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 C19orf57Q0VDD7 668 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 STK4Q13043 487 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 FNDC3BQ53EP0 1204 aaKnown RBP11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 MPP7Q5T2T1 576 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 CEP135Q66GS9 1140 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 TMEM215Q68D42 235 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 PM20D1Q6GTS8 502 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 SPOPLQ6IQ16 392 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 USP30Q70CQ3 517 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 FAM124AQ86V42 546 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 KIAA0895Q8NCT3 520 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 BIRC7Q96CA5 298 aa11.49□□□□□ -0.57
SNRNP200-207ENST00000493271 ACE2Q9BYF1 805 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms