RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 KIAA1211LQ6NV74 962 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 DENND1BQ6P3S1 775 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CYP2U1Q7Z449 544 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 KIAA0907Q7Z7F0 614 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 ZNF557Q8N988 423 aaPredicted RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CLEC4CQ8WTT0 213 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 SHC3Q92529 594 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 DDX50Q9BQ39 737 aaKnown RBP11.97□□□□□ -0.49
LRTM1-202ENST00000493075 MIS12Q9H081 205 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 NUP62CLQ9H1M0 184 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 ST7Q9NRC1 585 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CACNA2D2Q9NY47 1150 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CALCOCO1Q9P1Z2 691 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 CLEC4EQ9ULY5 219 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 SPTBN4Q9H254 2564 aa11.97□□□□□ -0.49
LRTM1-202ENST00000493075 BECN2A8MW95 431 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 WASH3PC4AMC7 463 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 KHNYNO15037 678 aaKnown RBP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 AP5Z1O43299 807 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 MSI1O43347 362 aaKnown RBP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 THAP12O43422 761 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 ACSL4O60488 711 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 NCAM1P13591 858 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 NDUFV2P19404 249 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 HOXD12P35452 270 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 DHPSP49366 369 aaPredicted RBP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 STARD3Q14849 445 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 STPG1Q5TH74 334 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 IL31Q6EBC2 164 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 GJB7Q6PEY0 223 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 SYT12Q8IV01 421 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 FRMD1Q8N878 549 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 DQX1Q8TE96 717 aaKnown RBP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 SLC39A13Q96H72 371 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 MRGPRX1Q96LB2 322 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 SERPINB11Q96P15 392 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 LHX5Q9H2C1 402 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 RXFP3Q9NSD7 469 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 EVLQ9UI08 416 aaPredicted RBP11.96□□□□□ -0.49
LRTM1-202ENST00000493075 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 TLR6Q9Y2C9 796 aa11.96□□□□□ -0.49
LRTM1-202ENST00000493075 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 PAPSS1O43252 624 aaPredicted RBP11.95□□□□□ -0.5
LRTM1-202ENST00000493075 TSPAN3O60637 253 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 GLI1P08151 1106 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 C7P10643 843 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 HLA-FP30511 346 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 IL12RB1P42701 662 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 YWHAZP63104 245 aaKnown RBP11.95□□□□□ -0.5
LRTM1-202ENST00000493075 PTK2Q05397 1052 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 ZNF234Q14588 700 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 ARHGAP44Q17R89 818 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 DPCR1Q3MIW9 517 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 VWA3BQ502W6 1294 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 PIK3R6Q5UE93 754 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 PEAR1Q5VY43 1037 aaPredicted RBP11.95□□□□□ -0.5
LRTM1-202ENST00000493075 TMEM215Q68D42 235 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 TMEFF1Q8IYR6 380 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 WDTC1Q8N5D0 677 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 PIGKQ92643 395 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 TUBGCP2Q9BSJ2 902 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 SMOC1Q9H4F8 434 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 SIX2Q9NPC8 291 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 ITM2CQ9NQX7 267 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 LMBRD1Q9NUN5 540 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 CYTH4Q9UIA0 394 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 NAALADL1Q9UQQ1 740 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 RAD54BQ9Y620 910 aa11.95□□□□□ -0.5
LRTM1-202ENST00000493075 IGHV1OR15-9A0A0B4J2B8 117 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 E5RJQ4 531 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 FOXN3O00409 490 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 CAPN9O14815 690 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 USP8P40818 1118 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 PTGER3P43115 390 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 SNX16P57768 344 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 BPIFB4P59827 614 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 APBA1Q02410 837 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 RPL6Q02878 288 aaKnown RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 PDCLQ13371 301 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 EIF4EBP2Q13542 120 aaPredicted RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 FUT11Q495W5 492 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 FAM133BQ5BKY9 247 aaKnown RBP11.94□□□□□ -0.5
LRTM1-202ENST00000493075 EFHC1Q5JVL4 640 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 SYPL2Q5VXT5 272 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 LYSMD4Q5XG99 296 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 TCEAL6Q6IPX3 200 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 DPY19L2P1Q6NXN4 242 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 ADIPOR2Q86V24 386 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 AHI1Q8N157 1196 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 CEP76Q8TAP6 659 aa11.94□□□□□ -0.5
LRTM1-202ENST00000493075 TCEAL3Q969E4 200 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms