RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ASNSD1Q9NWL6 643 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 DDX43Q9NXZ2 648 aaKnown RBP4.38□□□□□ -1.71
BRCA1-220ENST00000492859 SMPD3Q9NY59 655 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-220ENST00000492859 TMOD3Q9NYL9 352 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 KLK14Q9P0G3 267 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 SAMD15Q9P1V8 674 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 KLHL14Q9P2G3 628 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 LARSQ9P2J5 1176 aaKnown RBP4.38□□□□□ -1.71
BRCA1-220ENST00000492859 ASH2LQ9UBL3 628 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 SMG5Q9UPR3 1016 aaKnown RBP4.38□□□□□ -1.71
BRCA1-220ENST00000492859 LIPT1Q9Y234 373 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 NUDCQ9Y266 331 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 PCDHB5Q9Y5E4 795 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 PCDHB14Q9Y5E9 798 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 BACE2Q9Y5Z0 518 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 PMF1-BGLAPU3KQ54 211 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 FAM205AQ6ZU69 1335 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 PLEKHG2Q9H7P9 1386 aa4.38□□□□□ -1.71
BRCA1-220ENST00000492859 MYO15BQ96JP2 1530 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 A0A1W2PPC4 97 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 FAM234BA2RU67 622 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 AHRRA9YTQ3 701 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CDK2AP1O14519 115 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ANGPT2O15123 496 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 RAD51BO15315 384 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 FOXP2O15409 715 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NUDT21O43809 227 aaKnown RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 GMFGO60234 142 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CILPO75339 1184 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 RBBP9O75884 186 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 C22orf31O95567 290 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 OPN1LWP04000 364 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ALPPP05187 535 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CCDC192P0DO97 292 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ACRP10323 421 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ALPPL2P10696 532 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CLUP10909 449 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CYP19A1P11511 503 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NAGAP17050 411 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CTRB1P17538 263 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 POLR2EP19388 210 aaKnown RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NFKBIAP25963 317 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TKTP29401 623 aaKnown RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 GCKP35557 465 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ETV5P41161 510 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 PTGIRP43119 386 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MRPL12P52815 198 aaKnown RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 GSDMDP57764 484 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TSPAN5P62079 268 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 YPEL5P62699 121 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CYP27A1Q02318 531 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TYRO3Q06418 890 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NPRL3Q12980 569 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 DUSP4Q13115 394 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SLC12A1Q13621 1099 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SPCS2Q15005 226 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MYLK3Q32MK0 819 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ADCK5Q3MIX3 580 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SLC9B1Q4ZJI4 515 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SGO1Q5FBB7 561 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 EXOSC6Q5RKV6 272 aaKnown RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ERMARDQ5T6L9 678 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CTRB2Q6GPI1 263 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CEP85Q6P2H3 762 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SLC36A4Q6YBV0 504 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MACC1Q6ZN28 852 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 UNC5AQ6ZN44 842 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MAEAQ7L5Y9 396 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TAS2R42Q7RTR8 314 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TMCO2Q7Z6W1 182 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CPLX4Q7Z7G2 160 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 DSG4Q86SJ6 1040 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 FJX1Q86VR8 437 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 LRRC6Q86X45 466 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NUDT13Q86X67 352 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 CAMK1DQ8IU85 385 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 C10orf67Q8IYJ2 551 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SYCE1Q8N0S2 351 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ARFGAP2Q8N6H7 521 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 POU5F2Q8N7G0 328 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 NEK11Q8NG66 645 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ZNF384Q8TF68 577 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 STYXQ8WUJ0 223 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SLC13A3Q8WWT9 602 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 LIPHQ8WWY8 451 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SLC5A5Q92911 643 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 FAM162AQ96A26 154 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 GRAMD1AQ96CP6 724 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 RNF125Q96EQ8 232 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 PGBD1Q96JS3 809 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MYRFLQ96LU7 910 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MAGEB10Q96LZ2 347 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ZFYVE21Q9BQ24 234 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 SELENOSQ9BQE4 189 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 ARHGAP9Q9BRR9 750 aa4.37□□□□□ -1.71
BRCA1-220ENST00000492859 MLPHQ9BV36 600 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms