RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 XPO6Q96QU8 1125 aaKnown RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 SMOQ99835 787 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 GPR174Q9BXC1 333 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 GAREM1Q9H706 876 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 KIAA1586Q9HCI6 787 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 DMAP1Q9NPF5 467 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-213ENST00000492506 ST7Q9NRC1 585 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 TM7SF3Q9NS93 570 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 COMMD8Q9NX08 183 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 WDR35Q9P2L0 1181 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 FBXO10Q9UK96 956 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 STON1Q9Y6Q2 735 aa13.81□□□□□ -0.2
HDAC3-213ENST00000492506 A0A087WV48 116 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 METTL12A8MUP2 240 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 EIF3CLB5ME19 914 aaKnown RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 PPP1R12AO14974 1030 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 TGFB1I1O43294 461 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 SMC2O95347 1197 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 IGLV3-19P01714 112 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 NCAM1P13591 858 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 TNNI1P19237 187 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 ACO1P21399 889 aaKnown RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 DGKGP49619 791 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 CDH8P55286 799 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 HLA-BQ31612 363 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 EPM2AIP1Q7L775 607 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 RDH13Q8NBN7 331 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 SMARCD1Q96GM5 515 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 CRELD1Q96HD1 420 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 EIF3CQ99613 913 aaKnown RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 PRDM16Q9HAZ2 1276 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 CYLDQ9NQC7 956 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 ANO10Q9NW15 660 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 NXF1Q9UBU9 619 aaKnown RBP13.8□□□□□ -0.2
HDAC3-213ENST00000492506 ADAM21Q9UKJ8 722 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 MTMR6Q9Y217 621 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 PCDHGB2Q9Y5G2 931 aa13.8□□□□□ -0.2
HDAC3-213ENST00000492506 MUC22E2RYF6 1773 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-213ENST00000492506 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 MEI4A8MW99 385 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 BCAT2O15382 392 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-213ENST00000492506 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 ATICP31939 592 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 MATKP42679 507 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 IL12RB1P42701 662 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 TPMTP51580 245 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 CYP4F3Q08477 520 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 CT47A1Q5JQC4 288 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-213ENST00000492506 DCAF12L1Q5VU92 463 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 Q6ZNB5 142 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 CCDC73Q6ZRK6 1079 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 HOMEZQ8IX15 550 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 ADAM32Q8TC27 787 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 ZNF507Q8TCN5 953 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 NACA2Q9H009 215 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 SDCBP2Q9H190 292 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 MIR1-1HGQ9H1L0 117 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 CSNK1G1Q9HCP0 422 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 AGPAT3Q9NRZ7 376 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 KRT82Q9NSB4 513 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 THAP10Q9P2Z0 257 aaPredicted RBP13.79□□□□□ -0.2
HDAC3-213ENST00000492506 BTBD3Q9Y2F9 522 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 SLCO1B1Q9Y6L6 691 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 MYLKQ15746 1914 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 ATP8B3O60423 1300 aa13.79□□□□□ -0.2
HDAC3-213ENST00000492506 PTPRQQ9UMZ3 2332 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 BECN2A8MW95 431 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 AP1G2O75843 785 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 CER1O95813 267 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 STAT6P42226 847 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 GEN1Q17RS7 908 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 IL27RAQ6UWB1 636 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 HDXQ7Z353 690 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 TMPRSS6Q8IU80 811 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 SCUBE3Q8IX30 993 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 RBBP8NLQ8NC74 664 aaPredicted RBP13.78□□□□□ -0.2
HDAC3-213ENST00000492506 FAM71BQ8TC56 605 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 BHMTQ93088 406 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 PPP1R13BQ96KQ4 1090 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 CDC6Q99741 560 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 NMUR1Q9HB89 426 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
HDAC3-213ENST00000492506 PLK2Q9NYY3 685 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 EIF2B4Q9UI10 523 aaKnown RBP13.78□□□□□ -0.2
HDAC3-213ENST00000492506 SLC27A6Q9Y2P4 619 aa13.78□□□□□ -0.2
HDAC3-213ENST00000492506 ATMQ13315 3056 aa13.77□□□□□ -0.2
HDAC3-213ENST00000492506 A6NNZ2 444 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms