RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 DHRS4L1P0CG22 281 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 TMEM225BP0DP42 221 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 APEHP13798 732 aaKnown RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CREB1P16220 341 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ATF7P17544 494 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 DRD1P21728 446 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CERS1P27544 350 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 RENBPP51606 427 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRKAA2P54646 552 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PDE1AP54750 535 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ALDH18A1P54886 795 aaKnown RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 FAM3BP58499 235 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 LMAN2Q12907 356 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 DNASE1L3Q13609 305 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 TAF5Q15542 800 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ST3GAL2Q16842 350 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZNF260Q3ZCT1 412 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 AARS2Q5JTZ9 985 aaKnown RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 TTC22Q5TAA0 569 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ANKRD16Q6P6B7 361 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 C16orf89Q6UX73 402 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 PTCHD4Q6ZW05 846 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 RAB11FIP4Q86YS3 637 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 SAMD14Q8IZD0 417 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 SPATA5Q8NB90 893 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCT6BQ92526 530 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 RSC1A1Q92681 617 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 EVI5LQ96CN4 794 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 EDC3Q96F86 508 aaKnown RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 RTKNQ9BST9 563 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 VPS16Q9H269 839 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 KCNK9Q9NPC2 374 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 VPS45Q9NRW7 570 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 ASIC5Q9NY37 505 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 NKX1-2Q9UD57 310 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 HERC5Q9UII4 1024 aaKnown RBP3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 CNTN6Q9UQ52 1028 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 LZTS1Q9Y250 596 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 LRP12Q9Y561 859 aa3.35□□□□□ -1.87
HMGB1P30-201ENST00000492455 IGKV2D-30A0A075B6S6 120 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCDC187A0A096LP49 1063 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 KIF28PB7ZC32 967 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 PSMD9O00233 223 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CES2O00748 559 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 TTLL1O95922 423 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 ALADP13716 330 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CD19P15391 556 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 ADRA1DP25100 572 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CST5P28325 142 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 EPHB2P29323 1055 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 AKT1P31749 480 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCKARP32238 428 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCT8P50990 548 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 EEFSECP57772 596 aaKnown RBP3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 GPC5P78333 572 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 LAMB3Q13751 1172 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 PRKG1Q13976 671 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 TIGD6Q17RP2 521 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 PLAC9Q5JTB6 97 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 KIAA1161Q6NSJ0 714 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 CCDC144NLQ6NUI1 221 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 RINT1Q6NUQ1 792 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 NEK8Q86SG6 692 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 TRABD2AQ86V40 505 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 MOGAT3Q86VF5 341 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 RASAL3Q86YV0 1011 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZDHHC17Q8IUH5 632 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 SIRT6Q8N6T7 355 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 PNPLA1Q8N8W4 532 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 SLC22A17Q8WUG5 538 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 NPIPB3Q92617 1050 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 DPCDQ9BVM2 203 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 ZCWPW1Q9H0M4 648 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 ABHD16BQ9H3Z7 469 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 SEMA5BQ9P283 1151 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 SERGEFQ9UGK8 458 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 AMFRQ9UKV5 643 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 PCDHB7Q9Y5E2 793 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 AOX1Q06278 1338 aa3.34□□□□□ -1.87
HMGB1P30-201ENST00000492455 TCRBV5S1A1TA0A578 114 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM90A20PA6NIJ5 464 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 SLC38A8A6NNN8 435 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 H0Y3Z8 333 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 GCOM1H8Y6P7 765 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 PPP6R2O75170 966 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 DLDP09622 509 aaKnown RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 NPSP0C0P6 89 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 MYCLP12524 364 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 NDUFB7P17568 137 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 MMP13P45452 471 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 AP2B1P63010 937 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 RAE1P78406 368 aaKnown RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ZRSR2Q15696 482 aaKnown RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM187BQ17R55 369 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 GALNTL6Q49A17 601 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 L1TD1Q5T7N2 865 aaKnown RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 KLHL17Q6TDP4 642 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 MTHFD1LQ6UB35 978 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms