RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 BCAMP50895 628 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 TPTEP56180 551 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 EVX2Q03828 476 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 MSS51Q4VC12 460 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 FNBP1LQ5T0N5 605 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 TWF2Q6IBS0 349 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 TMEM26Q6ZUK4 368 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 ARHGEF19Q8IW93 802 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 RHOT1Q8IXI2 618 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 LSMEM1Q8N8F7 131 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 PDCD6IPQ8WUM4 868 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 RASSF5Q8WWW0 418 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 NKD2Q969F2 451 aaPredicted RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 DUS3LQ96G46 650 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 DHRS9Q9BPW9 319 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 C17orf80Q9BSJ5 609 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 RUSC1Q9BVN2 902 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 GDAP2Q9NXN4 497 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 SEL1LQ9UBV2 794 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 GOLGA8QA0A0J9YX86 632 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 GOLGA8OA6NCC3 632 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 GOLGA8NF8WBI6 632 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 CDK2AP1O14519 115 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 PMM2O15305 246 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 HTRA2O43464 458 aaPredicted RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 BANF1O75531 89 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 RNASEH2AO75792 299 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 CPNE6O95741 557 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 UGT2B4P06133 528 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 PRKCAP17252 672 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 GAP43P17677 238 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 PTPN1P18031 435 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 PTPN7P35236 360 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 IDUAP35475 653 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 EIF2B5Q13144 721 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 CDONQ4KMG0 1287 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 ATAD3BQ5T9A4 648 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 NSMFQ6X4W1 530 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 TRIM72Q6ZMU5 477 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 SLC9A9Q8IVB4 645 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 MARCH10Q8NA82 808 aaPredicted RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 ACMSDQ8TDX5 336 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 SH3YL1Q96HL8 342 aaPredicted RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 CLSTN3Q9BQT9 956 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 RNF38Q9H0F5 515 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 DUS2Q9NX74 493 aaKnown RBP9.97□□□□□ -0.81
VPS8-225ENST00000492449 TBC1D14Q9P2M4 693 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 COL18A1P39060 1754 aa9.97□□□□□ -0.81
VPS8-225ENST00000492449 ZNF195O14628 629 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 ACOT8O14734 319 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 HOXC11O43248 304 aaPredicted RBP9.96□□□□□ -0.81
VPS8-225ENST00000492449 AKAP10O43572 662 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 ICMTO60725 284 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.81
VPS8-225ENST00000492449 BBOX1O75936 387 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 PROSCO94903 275 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 BCL10O95999 233 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 INHBAP08476 426 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 XRCC1P18887 633 aaPredicted RBP9.96□□□□□ -0.81
VPS8-225ENST00000492449 S100A5P33763 92 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 CRHR1P34998 444 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 CLK2P49760 499 aaKnown RBP9.96□□□□□ -0.81
VPS8-225ENST00000492449 ADCY7P51828 1080 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 BFSP1Q12934 665 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 TMTC4Q5T4D3 741 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 PLA2G4FQ68DD2 849 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 NEK10Q6ZWH5 1172 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 MAVSQ7Z434 540 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 EFCAB3Q8N7B9 438 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 BHLHE22Q8NFJ8 381 aaPredicted RBP9.96□□□□□ -0.81
VPS8-225ENST00000492449 TTC9Q92623 222 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 KLHL32Q96NJ5 620 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 SNX25Q9H3E2 840 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 ZHX3Q9H4I2 956 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 PDZD7Q9H5P4 517 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 HMG20AQ9NP66 347 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 AKIP1Q9NQ31 210 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 PTPRFP10586 1907 aa9.96□□□□□ -0.81
VPS8-225ENST00000492449 C1orf232A0A0U1RR37 186 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 FAM170AA1A519 330 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 SYCE1LA8MT33 242 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 MED24O75448 989 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 NTRK1P04629 796 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 LDHBP07195 334 aaKnown RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 NAT2P11245 290 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 ZNF182P17025 639 aaPredicted RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 JUNBP17275 347 aaPredicted RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 TUFMP49411 452 aaKnown RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 P2RX3P56373 397 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 TRAF2Q12933 501 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 INAVAQ3KP66 663 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 C6orf10Q5SRN2 563 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 PPP1R2P3Q6NXS1 205 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 BNC2Q6ZN30 1099 aaPredicted RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 PLEKHG7Q6ZR37 379 aa9.96□□□□□ -0.82
VPS8-225ENST00000492449 ZNF598Q86UK7 904 aaKnown RBP9.96□□□□□ -0.82
VPS8-225ENST00000492449 SLC51BQ86UW2 128 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms