RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 RENBPP51606 427 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 JAK3P52333 1124 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 GPC5P78333 572 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 RAE1P78406 368 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 CFHR3Q02985 330 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 SF3A3Q12874 501 aaKnown RBP eCLIP4.46□□□□□ -1.7
VTA1-204ENST00000491881 BIRC3Q13489 604 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 RAPGEF1Q13905 1077 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 KCNB1Q14721 858 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 MFSD13AQ14CX5 517 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 POSTNQ15063 836 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 ANKRD40Q6AI12 368 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 JMJD6Q6NYC1 403 aaPredicted RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 LDHAL6AQ6ZMR3 332 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 BCDIN3DQ7Z5W3 292 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 OTUD7AQ8TE49 926 aaPredicted RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 HMGB4Q8WW32 186 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 CPT1BQ92523 772 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 C3orf49Q96BT1 292 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 EDC3Q96F86 508 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 CCDC17Q96LX7 622 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 TRAPPC9Q96Q05 1148 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 FYTTD1Q96QD9 318 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 ADGRE3Q9BY15 652 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 SEPSECSQ9HD40 501 aaKnown RBP4.46□□□□□ -1.7
VTA1-204ENST00000491881 VPS45Q9NRW7 570 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 RXFP3Q9NSD7 469 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 ADAM21Q9UKJ8 722 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 DAPP1Q9UN19 280 aa4.46□□□□□ -1.7
VTA1-204ENST00000491881 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 CCDC187A0A096LP49 1063 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 UBE2Q2LH0YL09 131 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 H7C1Q1 480 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 LARGE1O95461 756 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 APEHP13798 732 aaKnown RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 PNLIPRP1P54315 467 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 RNASELQ05823 741 aaKnown RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 TRIM60Q495X7 471 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 CERKLQ49MI3 558 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 C4orf46Q504U0 113 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 ANKRD45Q5TZF3 282 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 VSTM1Q6UX27 236 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 DCDC5Q6ZRR9 648 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 ZNF354CQ86Y25 554 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 Q8N9P0 234 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 OR52L2PQ8NGH6 319 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 SCAMP5Q8TAC9 235 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D20Q96BZ9 403 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 MCRS1Q96EZ8 462 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 PRR11Q96HE9 360 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 REXO5Q96IC2 774 aaKnown RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 PAAF1Q9BRP4 392 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 TAF1DQ9H5J8 278 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 LIN7CQ9NUP9 197 aaKnown RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 NDUFAF4Q9P032 175 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 LUZP4Q9P127 313 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.45□□□□□ -1.7
VTA1-204ENST00000491881 FZD4Q9ULV1 537 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 C19orf53Q9UNZ5 99 aaPredicted RBP4.45□□□□□ -1.7
VTA1-204ENST00000491881 CNTN6Q9UQ52 1028 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 PCDHB7Q9Y5E2 793 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 PCDHGB3Q9Y5G1 929 aa4.45□□□□□ -1.7
VTA1-204ENST00000491881 CGB1A6NKQ9 187 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 BTBD19C9JJ37 291 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CLIC1O00299 241 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 FYB1O15117 783 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CST5P28325 142 aaPredicted RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 DUSP1P28562 367 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CCT5P48643 541 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 WDR5P61964 334 aaKnown RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 TAF5Q15542 800 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CNGA3Q16281 694 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 FAM187BQ17R55 369 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 AAK1Q2M2I8 961 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 ADCK5Q3MIX3 580 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CC2D1BQ5T0F9 858 aaKnown RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 ACSM6Q6P461 480 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 ZNF788Q6ZQV5 615 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 LINC01465Q8N7H1 131 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 GLMPQ8WWB7 406 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 NPIPB3Q92617 1050 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 GOLGA1Q92805 767 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 REPS1Q96D71 796 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CHMP4AQ9BY43 222 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 RNF26Q9BY78 433 aaPredicted RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 VPS16Q9H269 839 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 CDCP1Q9H5V8 836 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 ABHD10Q9NUJ1 306 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 ASIC5Q9NY37 505 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 KIF17Q9P2E2 1029 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 ARPP21Q9UBL0 812 aaPredicted RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 SRP68Q9UHB9 627 aaKnown RBP4.44□□□□□ -1.7
VTA1-204ENST00000491881 DGKBQ9Y6T7 804 aa4.44□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3DA0A087WVF3 549 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms